RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SLC35A1P78382 337 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 IFFO1Q0D2I5 559 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 EPS8Q12929 822 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 RAB35Q15286 201 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 CHI3L2Q15782 390 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 SWI5Q1ZZU3 235 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 MST1LQ2TV78 715 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 FAM174BQ3ZCQ3 159 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 GPAT3Q53EU6 434 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 PAQR6Q6TCH4 344 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 CASP12Q6UXS9 341 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 C1QTNF6Q9BXI9 259 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 CDC42EP3Q9UKI2 254 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 POU2F3Q9UKI9 436 aa11.47□□□□□ -0.57
MRPL55-228ENST00000476267 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.47□□□□□ -0.57
MRPL55-228ENST00000476267 DSPPQ9NZW4 1301 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 ATP6V1G2-DDX39BF2Z307 99 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 PHF1O43189 567 aaPredicted RBP11.46□□□□□ -0.57
MRPL55-228ENST00000476267 MYZAPP0CAP1 466 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 IGHV4-31P0DP07 118 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 MPGP29372 298 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 CDKN2CP42773 168 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 EFNA4P52798 201 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 MVDP53602 400 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 CLNS1AP54105 237 aaKnown RBP11.46□□□□□ -0.57
MRPL55-228ENST00000476267 C9orf135Q5VTT2 229 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 LRRC74BQ6ZQY2 392 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 RNF130Q86XS8 419 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 VPS37AQ8NEZ2 397 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 FAM168AQ92567 244 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 PROX1Q92786 737 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 PMM1Q92871 262 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 DDIT4LQ96D03 193 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 ZNF385AQ96PM9 386 aaKnown RBP11.46□□□□□ -0.57
MRPL55-228ENST00000476267 NUF2Q9BZD4 464 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 MEAF6Q9HAF1 191 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 SSU72Q9NP77 194 aaKnown RBP11.46□□□□□ -0.57
MRPL55-228ENST00000476267 PARPBPQ9NWS1 579 aa11.46□□□□□ -0.57
MRPL55-228ENST00000476267 WDR91A4D1P6 747 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 CDHR4A6H8M9 788 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 LIPT2A6NK58 231 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 AQP7P3A6NL99 342 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 LY6HO94772 140 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 SNUPNO95149 360 aaKnown RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 F12P00748 615 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 CSF3P09919 207 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 ZNF16P17020 682 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 LBPP18428 481 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 APOBEC3AP31941 199 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 CHI3L1P36222 383 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 ACAA2P42765 397 aaKnown RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 SLC1A6P48664 564 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 UFM1P61960 85 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 TXNL4AP83876 142 aaKnown RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 HPCAP84074 193 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 MPP2Q14168 576 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 TNFAIP8L3Q5GJ75 292 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 COX20Q5RI15 118 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 MRPL2Q5T653 305 aaKnown RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 DEPDC4Q8N2C3 294 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 MREGQ8N565 214 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 TMEM99Q8N816 258 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 WDR60Q8WVS4 1066 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 TMEM158Q8WZ71 300 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 NAA11Q9BSU3 229 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 SF3B5Q9BWJ5 86 aaKnown RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 PIF1Q9H611 641 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 MTHFD2LQ9H903 347 aaPredicted RBP11.45□□□□□ -0.58
MRPL55-228ENST00000476267 FKRPQ9H9S5 495 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 AIG1Q9NVV5 245 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 UPB1Q9UBR1 384 aa11.45□□□□□ -0.58
MRPL55-228ENST00000476267 STAB1Q9NY15 2570 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 IGHV1-18A0A0C4DH31 117 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 CFAP73A6NFT4 308 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 CCDC154A6NI56 674 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 SDHDO14521 159 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 PGRP06401 933 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 DBIP07108 87 aaKnown RBP11.44□□□□□ -0.58
MRPL55-228ENST00000476267 S100A3P33764 101 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 THBS2P35442 1172 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 TGFBR3Q03167 851 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 CEACAM7Q14002 265 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 GSTA3Q16772 222 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 HIKESHIQ53FT3 197 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 OTUD3Q5T2D3 398 aaPredicted RBP11.44□□□□□ -0.58
MRPL55-228ENST00000476267 LINGO2Q7L985 606 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 OR9K2Q8NGE7 335 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 SORCS2Q96PQ0 1159 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 PANX1Q96RD7 426 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 NELFAQ9H3P2 528 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 SLC6A13Q9NSD5 602 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 PNPOQ9NVS9 261 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 RLIMQ9NVW2 624 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 PRDM4Q9UKN5 801 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 MOKQ9UQ07 419 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 CHST2Q9Y4C5 530 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 GPR45Q9Y5Y3 372 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 ATP23Q9Y6H3 246 aa11.44□□□□□ -0.58
MRPL55-228ENST00000476267 PLCE1Q9P212 2302 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms