RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CNOT2Q9NZN8 540 aaKnown RBP12.45□□□□□ -0.42
TRAF4-210ENST00000475329 ERVK-18Q9QC07 812 aa12.45□□□□□ -0.42
TRAF4-210ENST00000475329 CHRNA9Q9UGM1 479 aa12.45□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF229Q9UJW7 825 aa12.45□□□□□ -0.42
TRAF4-210ENST00000475329 KIAA1549Q9HCM3 1950 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 A0A087WZY1 265 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 SNTNA6NMZ2 147 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 KDM4EB2RXH2 506 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 SNX4O95219 450 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 PPP1R3DO95685 299 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 MT-ATP6P00846 226 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 HIST1H2ABP04908 130 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 ASAH2BP0C7U1 165 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 PIPP12273 146 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 RPS5P46782 204 aaKnown RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 MAP2K6P52564 334 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 GTF2A1P52655 376 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 PRPS1P60891 318 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 OC90Q02509 493 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 PIGFQ07326 219 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 INPP5JQ15735 1006 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 C1orf140Q5VVS0 124 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 HIST3H2AQ7L7L0 130 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 PRSS48Q7RTY5 328 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 NANOGNBQ7Z5D8 188 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 SATL1Q86VE3 508 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 SPARTQ8N0X7 666 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 SVOPQ8N4V2 548 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 WDSUB1Q8N9V3 476 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 THAP4Q8WY91 577 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 GGHQ92820 318 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 FGF11Q92914 225 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 HIST1H2ACQ93077 130 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 TAAR8Q969N4 342 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 LRR1Q96L50 414 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF582Q96NG8 517 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 RHNO1Q9BSD3 238 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 COPS4Q9BT78 406 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 FAM192AQ9GZU8 254 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 ENKD1Q9H0I2 346 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 FN3KQ9H479 309 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 PROK2Q9HC23 129 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 ANKRD10Q9NXR5 420 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 STMN3Q9NZ72 180 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 FBXL2Q9UKC9 423 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 HIF3AQ9Y2N7 669 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 RPL36Q9Y3U8 105 aaKnown RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 SPIN1Q9Y657 262 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-210ENST00000475329 MED13Q9UHV7 2174 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 NCKAP5O14513 1909 aa12.44□□□□□ -0.42
TRAF4-210ENST00000475329 SMIM31A0A1B0GVY4 71 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 ZC3H12DA2A288 527 aaKnown RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 ARGFXA6NJG6 315 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 RIIAD1A6NNX1 92 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF208O43345 1280 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 NPIPB7O75200 414 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 WISP1O95388 367 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 IFNGP01579 166 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 MT-ND2P03891 347 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 CDK1P06493 297 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 DBTP11182 482 aaKnown RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 JUNBP17275 347 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 HK1P19367 917 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 UQCRC1P31930 480 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 RPL4P36578 427 aaKnown RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 EIF1P41567 113 aaKnown RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF91Q05481 1191 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 NEDD8Q15843 81 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 TBC1D25Q3MII6 688 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 FAM69AQ5T7M9 428 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 ATP1A1-AS1Q5TC04 95 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 MAMDC2Q7Z304 686 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 MDGA2Q7Z553 956 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 STX19Q8N4C7 294 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 PSD4Q8NDX1 1056 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 OR1J4Q8NGS1 313 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 OR6S1Q8NH40 331 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 RFKQ969G6 155 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 ZBTB8AQ96BR9 441 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 DDIT4LQ96D03 193 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 GPX7Q96SL4 187 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 UTP23Q9BRU9 249 aaKnown RBP12.43□□□□□ -0.42
TRAF4-210ENST00000475329 PTDSS2Q9BVG9 487 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 OR11A1Q9GZK7 315 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 AMBNQ9NP70 447 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 TIMMDC1Q9NPL8 285 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 CMC2Q9NRP2 79 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 SERINC1Q9NRX5 453 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 GPR83Q9NYM4 423 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 NDUFA13Q9P0J0 144 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 GPR52Q9Y2T5 361 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 SLC6A5Q9Y345 797 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 CFAP54Q96N23 3096 aa12.43□□□□□ -0.42
TRAF4-210ENST00000475329 IRGMA1A4Y4 181 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 MCIDASD6RGH6 385 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 G3V3Y1 287 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 M0R3G1 203 aa12.42□□□□□ -0.42
TRAF4-210ENST00000475329 CDK2AP1O14519 115 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms