RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 TRIM63Q969Q1 353 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 C16orf58Q96GQ5 468 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM80Q96HE8 168 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 AMDHD1Q96NU7 426 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 OPALINQ96PE5 141 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 BBC3Q96PG8 261 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 NEDD4LQ96PU5 975 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TRNT1Q96Q11 434 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SNX18Q96RF0 628 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 GPA33Q99795 319 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 MESP1Q9BRJ9 268 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 FNDC11Q9BVV2 318 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TSSK6Q9BXA6 273 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 OR8D2Q9GZM6 311 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 QRSL1Q9H0R6 528 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CDCP1Q9H5V8 836 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 RERGLQ9H628 205 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TRIM45Q9H8W5 580 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ANKRA2Q9H9E1 313 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 HHATLQ9HCP6 504 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 RANGRFQ9HD47 186 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC35C2Q9NQQ7 365 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ACSS1Q9NUB1 689 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ZCCHC3Q9NUD5 404 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PRODH2Q9UF12 536 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 KCNN3Q9UGI6 736 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 A4GNTQ9UNA3 340 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 YARS2Q9Y2Z4 477 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 RPL36Q9Y3U8 105 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PCDHGB6Q9Y5F9 930 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PEX16Q9Y5Y5 336 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CPAMD8Q8IZJ3 1885 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SPEGQ15772 3267 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SCN2AQ99250 2005 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 A0A1W2PRQ8 180 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 OR5H15A6NDH6 313 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 H3BUI4 141 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 MASP2O00187 686 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 FAAHO00519 579 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 RGS5O15539 181 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PRKYO43930 277 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PRAMEF2O60811 474 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 UGT2B17O75795 530 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 EPPINO95925 133 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PTTG1O95997 202 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PDGFAP04085 211 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 IGKV3-11P04433 115 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TP53P04637 393 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 HMGN2P05204 90 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SCG5P05408 212 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CD46P15529 392 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 NT5EP21589 574 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PSMA1P25786 263 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TNFSF8P32971 234 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CRYBB2P43320 205 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TGM4P49221 684 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SMIM11AP58511 58 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SNRPD2P62316 118 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 RNF4P78317 190 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 GINS1Q14691 196 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 LASP1Q14847 261 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 PRICKLE4Q2TBC4 344 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TIMM50Q3ZCQ8 353 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SPANXN2Q5MJ10 180 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 HLA-DQA1Q5Y7H0 255 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM205BPQ63HN1 556 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 OPN5Q6U736 354 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 LINC00696Q6ZRV3 163 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 Q6ZS92 163 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 NRARPQ7Z6K4 114 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CCDC190Q86UF4 302 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 OR8H2Q8N162 312 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 BEST3Q8N1M1 668 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 VWA5B2Q8N398 1253 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF843Q8N446 348 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 NANOGP1Q8N7R0 232 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM178AQ8NBL3 297 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 FAM98AQ8NCA5 519 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 OR4K5Q8NGD3 323 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 OR8J1Q8NGP2 316 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TMEM203Q969S6 136 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TRMT61AQ96FX7 289 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ST6GAL2Q96JF0 529 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SLC35G5Q96KT7 338 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 C5orf34Q96MH7 638 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ZNF681Q96N22 645 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 FUZQ9BT04 418 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 TAPBPLQ9BX59 468 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ASPNQ9BXN1 380 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 POLR2J2Q9GZM3 115 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 SNTG1Q9NSN8 517 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 CCDC59Q9P031 241 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 P2RX2Q9UBL9 471 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ACAD8Q9UKU7 415 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 MKLN1Q9UL63 735 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 ERVK-19Q9WJR5 959 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 A3GALT2U3KPV4 340 aa3.82□□□□□ -1.8
GAPVD1-216ENST00000474637 FREM2Q5SZK8 3169 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms