RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ZNF24P17028 368 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CYP2B6P20813 491 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 IGHV1-2P23083 117 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 GCAP28676 217 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 FGF9P31371 208 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 EPHX2P34913 555 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 GYG1P46976 350 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 DAP3P51398 398 aaKnown RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PRKXP51817 358 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CCNG1P51959 295 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 SEC61GP60059 68 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 VSNL1P62760 191 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 MRPS11P82912 194 aaKnown RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CHRNB3Q05901 458 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ST3GAL3Q11203 375 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 MRPL28Q13084 256 aaKnown RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CUL2Q13617 745 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 TGIF1Q15583 401 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 MRGPRG-AS1Q2M3A8 158 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 TP53I3Q53FA7 332 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PDZK1Q5T2W1 519 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 WSCD1Q658N2 575 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC137Q6PK04 289 aaKnown RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 METAP1DQ6UB28 335 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 C6orf89Q6UWU4 347 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF497Q6ZNH5 498 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC73Q6ZRK6 1079 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 H2BFWTQ7Z2G1 175 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 C9orf40Q8IXQ3 194 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 LINC01561Q8N1V8 128 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 BBS5Q8N3I7 341 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 FGFRL1Q8N441 504 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 POM121L12Q8N7R1 296 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ATP6V0D2Q8N8Y2 350 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ADAMTS16Q8TE57 1224 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 SCFD1Q8WVM8 642 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CXorf40BQ96DE9 158 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 MS4A14Q96JA4 679 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CCNL2Q96S94 520 aaPredicted RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 APOL2Q9BQE5 337 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 YIPF3Q9GZM5 350 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 METTL7AQ9H8H3 244 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ISG20L2Q9H9L3 353 aaKnown RBP3.34□□□□□ -1.87
BRCA1-212ENST00000473961 POLE4Q9NR33 117 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 CLEC5AQ9NY25 188 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 SLC2A8Q9NY64 477 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF581Q9P0T4 197 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 IFNKQ9P0W0 207 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 SPATA7Q9P0W8 599 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PHF11Q9UIL8 331 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 IKZF2Q9UKS7 526 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 POLDIP2Q9Y2S7 368 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PLLPQ9Y342 182 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 PPIAL4AQ9Y536 164 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 STYXL1Q9Y6J8 313 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 SH3TC1Q8TE82 1336 aa3.34□□□□□ -1.87
BRCA1-212ENST00000473961 FANCD2Q9BXW9 1451 aa3.34□□□□□ -1.88
BRCA1-212ENST00000473961 EFCAB6Q5THR3 1501 aa3.34□□□□□ -1.88
BRCA1-212ENST00000473961 NESP48681 1621 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 RNF17Q9BXT8 1623 aaKnown RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 KDM5AP29375 1690 aaKnown RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 IQGAP1P46940 1657 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 MYOM1P52179 1685 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 NOTCH4Q99466 2003 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 A0A1B0GVL5 298 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 GOLGA8OA6NCC3 632 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 TRDCB7Z8K6 153 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 F8VZ95 297 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 GOLGA8NF8WBI6 632 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 SULT2B1O00204 365 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 HIP1O00291 1037 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 NBR2O15453 112 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 OR10H3O60404 316 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 NOL4O94818 638 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 ATP6V1G2O95670 118 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 FAM107AO95990 144 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 LGALS2P05162 132 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 STSP08842 583 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 RHOXF2BP0C7M4 288 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 MCF2P10911 925 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 IDO1P14902 403 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 COX5AP20674 150 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 IDSP22304 550 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 HMGB2P26583 209 aaKnown RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 HOXD10P28358 340 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 GNA11P29992 359 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 ALDH3A1P30838 453 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 CCR1P32246 355 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 TAGLN2P37802 199 aaKnown RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 MAP3K8P41279 467 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 RPL29P47914 159 aaKnown RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 CRYBB1P53674 252 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 ELF3P78545 371 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 OC90Q02509 493 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 RCN1Q15293 331 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 QRICH1Q2TAL8 776 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 GLYR1Q49A26 553 aaPredicted RBP3.33□□□□□ -1.88
BRCA1-212ENST00000473961 C6orf226Q5I0X4 101 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 ARMC12Q5T9G4 340 aa3.33□□□□□ -1.88
BRCA1-212ENST00000473961 REG3GQ6UW15 175 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms