RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 PINK1Q9BXM7 581 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ARMC7Q9H6L4 198 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 EVA1AQ9H8M9 152 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 UBQLN4Q9NRR5 601 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF701Q9NV72 531 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 FBXO34Q9NWN3 711 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 BAG5Q9UL15 447 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ABCG2Q9UNQ0 655 aa8.12□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF443Q9Y2A4 671 aaPredicted RBP8.12□□□□□ -1.11
SF3A1-206ENST00000471037 TLN2Q9Y4G6 2542 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 C17orf51A8MQB3 221 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 SCDO00767 359 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 UGT2B17O75795 530 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 PRKD3O94806 890 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 UTS2O95399 124 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 OPN1SWP03999 348 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 FCGR2AP12318 317 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 NID1P14543 1247 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 HPGDP15428 266 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 PPP3CBP16298 524 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 IL7RP16871 459 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 CD247P20963 164 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 TBXA2RP21731 343 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 TCEA1P23193 301 aaKnown RBP8.11□□□□□ -1.11
SF3A1-206ENST00000471037 SLC7A1P30825 629 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 EVI2BP34910 448 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 KCNJ5P48544 419 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 SUCLG1P53597 346 aaKnown RBP8.11□□□□□ -1.11
SF3A1-206ENST00000471037 SIRPAP78324 504 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 CHRNB3Q05901 458 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 IFI44LQ53G44 452 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 BEX5Q5H9J7 111 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF311Q5JNZ3 666 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 RNF220Q5VTB9 566 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 RAET1LQ5VY80 246 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 C22orf34Q6ZV56 151 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 PLEKHM3Q6ZWE6 761 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 FKBP9P1Q75LS8 142 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 FAM214BQ7L5A3 538 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF550Q7Z398 422 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 ZAR1Q86SH2 424 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 CMIPQ8IY22 773 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 ADGRG5Q8IZF4 528 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 OR2M3Q8NG83 312 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 FNDC9Q8TBE3 224 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 CANT1Q8WVQ1 401 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 GEMIN6Q8WXD5 167 aaKnown RBP8.11□□□□□ -1.11
SF3A1-206ENST00000471037 PROX1Q92786 737 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 SLC47A1Q96FL8 570 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 TPD52L3Q96J77 140 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 QRSL1Q9H0R6 528 aaKnown RBP8.11□□□□□ -1.11
SF3A1-206ENST00000471037 DSN1Q9H410 356 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 YY1AP1Q9H869 796 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.11□□□□□ -1.11
SF3A1-206ENST00000471037 PPP4R1LQ9P1A2 415 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 SLC13A4Q9UKG4 626 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 PROCRQ9UNN8 238 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 AURKCQ9UQB9 309 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 ZNF337Q9Y3M9 751 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 DTNAQ9Y4J8 743 aa8.11□□□□□ -1.11
SF3A1-206ENST00000471037 HEATR5AQ86XA9 2040 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 ZANQ9Y493 2812 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 NPIPA5A0A0B4J1W7 369 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 A0A1W2PQD3 144 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 OR2M5A3KFT3 312 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 NPIPA7E9PJI5 369 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 H0YC42 278 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 H3BNH8 94 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 SEC14L5O43304 696 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 KLF4O43474 513 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 MGRN1O60291 552 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 FADS1O60427 444 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 CRLF1O75462 422 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 OXSR1O95747 527 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 THBDP07204 575 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 FESP07332 822 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 NPIPA8P0DM63 369 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 RAP2AP10114 183 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 HK1P19367 917 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 CLK3P49761 638 aaKnown RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 ERFP50548 548 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 TPD52P55327 224 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 CLDN20P56880 219 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 RPS3AP61247 264 aaKnown RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 KCNJ10P78508 379 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 KRTAP1-1Q07627 177 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 RIPK1Q13546 671 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 PON3Q15166 354 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 MAPK14Q16539 360 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 DUSP7Q16829 419 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 GRAMD1BQ3KR37 738 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 GLYR1Q49A26 553 aaPredicted RBP8.1□□□□□ -1.11
SF3A1-206ENST00000471037 KLHL26Q53HC5 615 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 PDZK1Q5T2W1 519 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 VTCN1Q7Z7D3 282 aa8.1□□□□□ -1.11
SF3A1-206ENST00000471037 VRK2Q86Y07 508 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms