RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ICAM2P13598 275 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 PRKCAP17252 672 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 PCSK6P29122 969 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 TMBIM6P55061 237 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 LTBQ06643 244 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 Q0VFX4 171 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 KLHL22Q53GT1 634 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 PRAMEF20Q5VT98 475 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 ARHGAP11AQ6P4F7 1023 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 ARSKQ6UWY0 536 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 ADGRG3Q86Y34 549 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 DOK1Q99704 481 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 GPR87Q9BY21 358 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 ADAM18Q9Y3Q7 739 aa16.46■□□□□ 0.23
SMC4-211ENST00000469858 MRPS18BQ9Y676 258 aaKnown RBP16.46■□□□□ 0.23
SMC4-211ENST00000469858 LOC101059948A0A1B0GTJ6 334 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 STMND1H3BQB6 276 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 RAB36O95755 333 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 ZNF3P17036 446 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 HK1P19367 917 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 NR4A1P22736 598 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 MLF1P58340 268 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 PRPS1P60891 318 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 MED22Q15528 200 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 INPP5JQ15735 1006 aaPredicted RBP16.46■□□□□ 0.22
SMC4-211ENST00000469858 TIGD6Q17RP2 521 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 C1QL3Q5VWW1 255 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 SHFQ7M4L6 423 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 TMEM156Q8N614 296 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 MOSPD2Q8NHP6 518 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 LIPHQ8WWY8 451 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 ST8SIA1Q92185 356 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 RELTQ969Z4 430 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 CRELD1Q96HD1 420 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 NPAS1Q99742 590 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 HCAR1Q9BXC0 346 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 CHRNA9Q9UGM1 479 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 CLEC2DQ9UHP7 191 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 IER3IP1Q9Y5U9 82 aa16.46■□□□□ 0.22
SMC4-211ENST00000469858 PRR23D1E9PI22 279 aaPredicted RBP16.45■□□□□ 0.22
SMC4-211ENST00000469858 TERTO14746 1132 aaKnown RBP16.45■□□□□ 0.22
SMC4-211ENST00000469858 ASAH2BP0C7U1 165 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 PRR23D2P0DMB1 279 aaPredicted RBP16.45■□□□□ 0.22
SMC4-211ENST00000469858 AQP2P41181 271 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 HTR3AP46098 478 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 DBPQ10586 325 aaPredicted RBP16.45■□□□□ 0.22
SMC4-211ENST00000469858 RAB40BQ12829 278 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 CRMP1Q14194 572 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 ZNF362Q5T0B9 420 aaPredicted RBP16.45■□□□□ 0.22
SMC4-211ENST00000469858 DPY19L2P2Q6ZN68 376 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 GID4Q8IVV7 300 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 CYB561A3Q8NBI2 242 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 RAB2BQ8WUD1 216 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 YIPF6Q96EC8 236 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 OR5M11Q96RB7 305 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 MRPS18AQ9NVS2 196 aaKnown RBP16.45■□□□□ 0.22
SMC4-211ENST00000469858 DIMT1Q9UNQ2 313 aaKnown RBP16.45■□□□□ 0.22
SMC4-211ENST00000469858 ERGIC3Q9Y282 383 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 HIF3AQ9Y2N7 669 aa16.45■□□□□ 0.22
SMC4-211ENST00000469858 TRAV36DV7A0A075B6V5 113 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 ATE1O95260 518 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 HSMCR30P0CW71 290 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 HTR1FP30939 366 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 ZNF41P51814 821 aaPredicted RBP16.44■□□□□ 0.22
SMC4-211ENST00000469858 GABREP78334 506 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 NIPAL3Q6P499 406 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 SLC16A12Q6ZSM3 486 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 ZNF367Q7RTV3 350 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 NANOGNBQ7Z5D8 188 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 SIRT6Q8N6T7 355 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 OR52E2Q8NGJ4 325 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 KATNB1Q9BVA0 655 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 OR11A1Q9GZK7 315 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 FKRPQ9H9S5 495 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 KLHL1Q9NR64 748 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 ENPP5Q9UJA9 477 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 IRGMA1A4Y4 181 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 A8MVM7 634 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 M0R082 166 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 IFNGP01579 166 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 BGLAPP02818 100 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 HIST1H2ABP04908 130 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 HIST1H1CP16403 213 aaKnown RBP16.44■□□□□ 0.22
SMC4-211ENST00000469858 PAX7P23759 505 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 MSX1P28360 303 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 FOXF1Q12946 379 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 ITGADQ13349 1161 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 KLHL12Q53G59 568 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 PAQR6Q6TCH4 344 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 B3GLCTQ6Y288 498 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 HIST3H2AQ7L7L0 130 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 ANKRD13BQ86YJ7 626 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 SLC37A3Q8NCC5 494 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 SDR9C7Q8NEX9 313 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 OR4K13Q8NH42 304 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 HIST1H2ACQ93077 130 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 SLC25A36Q96CQ1 311 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 IRF2BPLQ9H1B7 796 aa16.44■□□□□ 0.22
SMC4-211ENST00000469858 HPF1Q9NWY4 346 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms