RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 BEST4Q8NFU0 473 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR52H1Q8NGJ2 320 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 OR51Q1Q8NH59 317 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 RAD51AP1Q96B01 352 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 PELOQ9BRX2 385 aaKnown RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 IFT27Q9BW83 186 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ZCCHC2Q9C0B9 1178 aaKnown RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 UBQLN3Q9H347 655 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 WDR26Q9H7D7 661 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 KRCC1Q9NPI7 259 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 SLC35C2Q9NQQ7 365 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 CTPS2Q9NRF8 586 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 SPATA2Q9UM82 520 aa8.84□□□□□ -0.99
HDAC3-205ENST00000469550 ARID1BQ8NFD5 2236 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-205ENST00000469550 GOLGA4Q13439 2230 aaKnown RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 URB1O60287 2271 aaKnown RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 PRAMEF26H0Y7S4 382 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 OR2A4O95047 310 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 SERPINA3P01011 423 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 TFP02787 698 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 ERGP11308 486 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 IFNGR1P15260 489 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 PSMB1P20618 241 aaKnown RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 KELP23276 732 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 ACP1P24666 158 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 HSD17B2P37059 387 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 CCR8P51685 355 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 NRG3P56975 720 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 ARHGAP19Q14CB8 494 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 SLC25A35Q3KQZ1 300 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 DMKNQ6E0U4 476 aaPredicted RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 ARL9Q6T311 187 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 HSD17B13Q7Z5P4 300 aaPredicted RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 C17orf64Q86WR6 236 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 ANKRD53Q8N9V6 530 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 OR11G2Q8NGC1 345 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 OR56A1Q8NGH5 318 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 SNIP1Q8TAD8 396 aaKnown RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 PCNPQ8WW12 178 aaKnown RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 DACT3Q96B18 629 aaPredicted RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 ZNF514Q96K75 400 aaPredicted RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 OR2A7Q96R45 310 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 UTP23Q9BRU9 249 aaKnown RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 C1QTNF2Q9BXJ5 285 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 TEX10Q9NXF1 929 aaPredicted RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 KLHL28Q9NXS3 571 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 PIPOXQ9P0Z9 390 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 C5AR2Q9P296 337 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 PPIEQ9UNP9 301 aaKnown RBP8.83□□□□□ -1
HDAC3-205ENST00000469550 CA5BQ9Y2D0 317 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 CHST2Q9Y4C5 530 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 FREM2Q5SZK8 3169 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 DOCK9Q9BZ29 2069 aa8.83□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3DA0A087WVF3 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3IA0A087WXS9 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3EA0A087X179 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3KA0A087X1G2 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 A0A0A6YYD5 115 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3FA6NER0 549 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 SLC22A31A6NKX4 558 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 CPSF4LA6NMK7 179 aaKnown RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3LB9A6J9 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 MCRIP1C9JLW8 97 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 L7N2F9 121 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 NDUFS4O43181 175 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SLC2A10O95528 541 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 MT-ND4P03905 459 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 IL5P05113 134 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 NMBP08949 121 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 FGF2P09038 288 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3HP0C7X1 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 EPXP11678 715 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 XPAP23025 273 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 NFYAP23511 347 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 NTSP30990 170 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TRHRP34981 398 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 GDNFP39905 211 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 GCGRP47871 477 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 MECP2P51608 486 aaKnown RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 METAP1P53582 386 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 AP3S2P59780 193 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 REEP5Q00765 189 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 DBPQ10586 325 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 ACSM3Q53FZ2 586 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 FAM27D1Q5T7N8 215 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 PIP5KL1Q5T9C9 394 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 HES3Q5TGS1 186 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3GQ6DHY5 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3CQ6IPX1 549 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 NKAIN4Q8IVV8 208 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 NRMQ8IXM6 262 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 TBC1D3Q8IZP1 549 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 TMEM99Q8N816 258 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 LMNTD1Q8N9Z9 388 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 MOSPD2Q8NHP6 518 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SLC2A12Q8TD20 617 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 SCARB1Q8WTV0 552 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 KISS1RQ969F8 398 aaPredicted RBP8.82□□□□□ -1
HDAC3-205ENST00000469550 LRIG1Q96JA1 1093 aa8.82□□□□□ -1
HDAC3-205ENST00000469550 PGLYRP3Q96LB9 341 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms