RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 C16orf74Q96GX8 76 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 SLC41A3Q96GZ6 507 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 COQ2Q96H96 371 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 IFT74Q96LB3 600 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 SLC38A2Q96QD8 506 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 RNF2Q99496 336 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 NAT9Q9BTE0 207 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 GON7Q9BXV9 100 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 MAGT1Q9H0U3 335 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 AZI2Q9H6S1 392 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 VCPKMTQ9H867 229 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 ZNF702PQ9H963 129 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 MCCC2Q9HCC0 563 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 MARCH5Q9NX47 278 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 ONECUT1Q9UBC0 465 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 ADAM28Q9UKQ2 775 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 ABCG2Q9UNQ0 655 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 ERVW-1Q9UQF0 538 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 CA5BQ9Y2D0 317 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 RPL36Q9Y3U8 105 aaKnown RBP2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 V9GY05 133 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 CHD4Q14839 1912 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 PNPLA6Q8IY17 1366 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
SOX2-OT-204ENST00000469278 TCRBV9S1A1TA0A576 114 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 BTBD17A6NE02 478 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 K7N7A8 449 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 TIMM8AO60220 97 aaPredicted RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 SNAPINO95295 136 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 CLDN9O95484 217 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 KLK3P07288 261 aaPredicted RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 CD1EP15812 388 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 IL12AP29459 219 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 AQP1P29972 269 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 RFC4P35249 363 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 DDX39BQ13838 428 aaKnown RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 SFT2D3Q587I9 215 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 PHYHD1Q5SRE7 291 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 OR52E8Q6IFG1 317 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 PGAP1Q75T13 922 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 RUFY3Q7L099 469 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 C17orf82Q86X59 251 aaPredicted RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 LRRC75A-AS1Q8N1F1 130 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 NECAB1Q8N987 351 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 ZNF740Q8NDX6 193 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 SETD7Q8WTS6 366 aaKnown RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 SCFD1Q8WVM8 642 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 UBE2E3Q969T4 207 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 C10orf35Q96D05 121 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 KLHDC3Q9BQ90 382 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 RIOK1Q9BRS2 568 aaKnown RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 YTHDF1Q9BYJ9 559 aaKnown RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 FN3KRPQ9HA64 309 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 FOLH1BQ9HBA9 442 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 THUMPD1Q9NXG2 353 aaKnown RBP2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 STAP1Q9ULZ2 295 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 RABL2BQ9UNT1 228 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 POLDIP2Q9Y2S7 368 aa2.35□□□□□ -2.03
SOX2-OT-204ENST00000469278 FAM240BA0A1B0GVZ2 78 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 ARHGEF35A5YM69 484 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 H0Y8G0 127 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 CXCL11O14625 94 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 ABCD4O14678 606 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 MBTPS2O43462 519 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 TOM1O60784 492 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 PALMO75781 387 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 MMP23AO75900 390 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 BBOX1O75936 387 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 TSPAN12O95859 305 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 LGI1O95970 557 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 ACTL6AO96019 429 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 SERPINA3P01011 423 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 BTDP43251 543 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 SULT1E1P49888 294 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 ATP5IP56385 69 aaPredicted RBP2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 OGDHQ02218 1023 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 KLRB1Q12918 225 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 PLD1Q13393 1074 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 OXA1LQ15070 435 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 MICBQ29980 383 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 NSUN5P1Q3KNT7 163 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 KCTD21Q4G0X4 260 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 BOLA3Q53S33 107 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 C9orf129Q5T035 196 aaKnown RBP2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 MARCH8Q5T0T0 291 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 C1orf146Q5VVC0 180 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 TIGD3Q6B0B8 471 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 UNQ9370/PRO34162Q6UXP9 181 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 SCARA5Q6ZMJ2 495 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 SLC26A11Q86WA9 606 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 ECHDC2Q86YB7 292 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 CNPY4Q8N129 248 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 OR2L13Q8N349 312 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 ACOT4Q8N9L9 421 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 FAM83FQ8NEG4 500 aaPredicted RBP2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 OR4K14Q8NGD5 310 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 OR52I1Q8NGK6 324 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 OR1L4Q8NGR5 311 aa2.34□□□□□ -2.03
SOX2-OT-204ENST00000469278 OR1E3Q8WZA6 343 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms