RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ZNF208O43345 1280 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 IL1BP01584 269 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 IGHG4P01861 327 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 IMPDH1P20839 514 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 FGF9P31371 208 aaPredicted RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 LEPP41159 167 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 OR3A4PP47883 348 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 RIPK4P57078 832 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 RPS14P62263 151 aaKnown RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 LRRC36Q1X8D7 754 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 TRIM16LQ309B1 348 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 BEND3Q5T5X7 828 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 ATL3Q6DD88 541 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 Q6ZPB1 254 aaPredicted RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 NLRP9Q7RTR0 991 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 MTURNQ8N3F0 131 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 FBXL16Q8N461 479 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 ATP6V0D2Q8N8Y2 350 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 EIF1ADQ8N9N8 165 aaKnown RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 ZNF184Q99676 751 aaPredicted RBP3.68□□□□□ -1.82
LSM5-209ENST00000468872 CCT7Q99832 543 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 TMEM43Q9BTV4 400 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 SLITRK2Q9H156 845 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 ZNF385DQ9H6B1 395 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 PLLPQ9Y342 182 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 EPG5Q9HCE0 2579 aa3.68□□□□□ -1.82
LSM5-209ENST00000468872 ZNF518AQ6AHZ1 1483 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 NLRP1Q9C000 1473 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 GPR179Q6PRD1 2367 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 IGLV3-10A0A075B6K4 115 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 TUBAL3A6NHL2 446 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 MPHOSPH10O00566 681 aaKnown RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 CXCL13O43927 109 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 HCN1O60741 890 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 LYPLA1O75608 230 aaPredicted RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 SURF6O75683 361 aaKnown RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 SEMG1P04279 462 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 HSPB1P04792 205 aaKnown RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 KLK2P20151 261 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 GRIA1P42261 906 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 DAP3P51398 398 aaKnown RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 P2RY4P51582 365 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 AIF1P55008 147 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 CEP55Q53EZ4 464 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 PRR30Q53SZ7 412 aaPredicted RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 C9orf129Q5T035 196 aaKnown RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 CCDC137Q6PK04 289 aaKnown RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 OR2L13Q8N349 312 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 SVOPLQ8N434 492 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 C11orf42Q8N5U0 333 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 OR5D13Q8NGL4 314 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 FGGYQ96C11 551 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 TBX15Q96SF7 602 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 GON7Q9BXV9 100 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 CAPS2Q9BXY5 557 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 SRXN1Q9BYN0 137 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 SMYD3Q9H7B4 428 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 VCPKMTQ9H867 229 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 LRRC40Q9H9A6 602 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 POPDC2Q9HBU9 364 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 NUDT15Q9NV35 164 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 TMEM9Q9P0T7 183 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 PHF11Q9UIL8 331 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 UBQLN1Q9UMX0 589 aaKnown RBP3.67□□□□□ -1.82
LSM5-209ENST00000468872 ADAMTS9Q9P2N4 1935 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 MIA2Q96PC5 1412 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 CHD6Q8TD26 2715 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 BRCA2P51587 3418 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 PXDNLA1KZ92 1463 aa3.67□□□□□ -1.82
LSM5-209ENST00000468872 PREX2Q70Z35 1606 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 K7N7A8 449 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 TNFSF11O14788 317 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 SLITRK3O94933 977 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 NCK1P16333 377 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 HOXD10P28358 340 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 AQP1P29972 269 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 TDO2P48775 406 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 EFNB2P52799 333 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 DIO3P55073 304 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 RIPPLY3P57055 190 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 FGL1Q08830 312 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 EGFEM1PQ0D2K5 195 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 SLC10A7Q0GE19 358 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 SFT2D3Q587I9 215 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 OR4F3Q6IEY1 312 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 TFAP2EQ6VUC0 442 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 DNM1P46Q6ZS02 220 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 SLC35F2Q8IXU6 374 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 CEND1Q8N111 149 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 MFSD9Q8NBP5 474 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 OR10H4Q8NGA5 316 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 OR8J1Q8NGP2 316 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 OR56B4Q8NH76 319 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 MRPS31Q92665 395 aaKnown RBP3.66□□□□□ -1.82
LSM5-209ENST00000468872 KLHDC3Q9BQ90 382 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 CDH9Q9ULB4 789 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 ASB3Q9Y575 518 aa3.66□□□□□ -1.82
LSM5-209ENST00000468872 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.66□□□□□ -1.82
LSM5-209ENST00000468872 FASNP49327 2511 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms