RNA–Protein interactions for RNA: ENST00000467301.1

LIMK2-208, Transcript of LIM domain kinase 2, human

TSL 3

Gene LIMK2, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIMK2-208	ENST00000467301	TMEM108	Q6UXF1	575 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	GPAT4	Q86UL3	456 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	P2RY8	Q86VZ1	359 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	ZNF440	Q8IYI8	595 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	PMM1	Q92871	262 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	HS6ST2	Q96MM7	605 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	C1QTNF6	Q9BXI9	259 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	TPT1P8	Q9HAU6	139 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	TMBIM4	Q9HC24	238 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	TAS2R16	Q9NYV7	291 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	CALML5	Q9NZT1	146 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	ZIM2	Q9NZV7	527 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	TRAPPC4	Q9Y296	219 aa		11.99	□□□□□ -0.49
LIMK2-208	ENST00000467301	CDHR4	A6H8M9	788 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	SHISA9	B4DS77	424 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	INAFM1	C9JVW0	142 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	AKR7A3	O95154	331 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	PGM3	O95394	542 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	GPI	P06744	558 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	CDH2	P19022	906 aa	Predicted RBP	11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	NTF4	P34130	210 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	ACVR1B	P36896	505 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	SLC16A1	P53985	500 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	FOXG1	P55316	489 aa	Predicted RBP	11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	STX1B	P61266	288 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	BNIP2	Q12982	314 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	LARS2	Q15031	903 aa	Known RBP	11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	PGGHG	Q32M88	737 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	SLC2A7	Q6PXP3	512 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	SLC38A5	Q8WUX1	472 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	TLCD1	Q96CP7	247 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	TMEM19	Q96HH6	336 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	MAEL	Q96JY0	434 aa	Known RBP	11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	TAPBPL	Q9BX59	468 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	ADPRHL2	Q9NX46	363 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	FLVCR1	Q9Y5Y0	555 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	USH1C	Q9Y6N9	552 aa		11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	ANK3	Q12955	4377 aa	Known RBP	11.98	□□□□□ -0.49
LIMK2-208	ENST00000467301	HIVEP2	P31629	2446 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	C5orf58	C9J3I9	102 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	OVOL3	O00110	214 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	FAAH	O00519	579 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	KRT33A	O76009	404 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	IGHV4-39	P01824	125 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	ITGA5	P08648	1049 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	SLC18A1	P54219	525 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	MAPK11	Q15759	364 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	AGAP6	Q5VW22	663 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	AP1AR	Q63HQ0	302 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	WBP2NL	Q6ICG8	309 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	PAQR6	Q6TCH4	344 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	SSX8	Q7RTT4	187 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	DEPDC4	Q8N2C3	294 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	TMEM99	Q8N816	258 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	ARMC7	Q9H6L4	198 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	PARPBP	Q9NWS1	579 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	MALT1	Q9UDY8	824 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	GDF2	Q9UK05	429 aa	Predicted RBP	11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	ZNF232	Q9UNY5	417 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	SLC25A15	Q9Y619	301 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	CSPG4	Q6UVK1	2322 aa		11.97	□□□□□ -0.49
LIMK2-208	ENST00000467301	HEATR1	Q9H583	2144 aa	Known RBP	11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	DSPP	Q9NZW4	1301 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	FAM234B	A2RU67	622 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	LIPT2	A6NK58	231 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	POLR3G	O15318	223 aa	Predicted RBP	11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	FRS3	O43559	492 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	NDUFS7	O75251	213 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	NUDT7	P0C024	238 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	TFPT	P0C1Z6	253 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	ZCCHC18	P0CG32	403 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	PRG2	P13727	222 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	CD40	P25942	277 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	MVD	P53602	400 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	H3F3A	P84243	136 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	ETFDH	Q16134	617 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	GABRA6	Q16445	453 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	ZNF311	Q5JNZ3	666 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	TSPO2	Q5TGU0	170 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	OR7E24	Q6IFN5	339 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	KLHL24	Q6TFL4	600 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	MSANTD1	Q6ZTZ1	278 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	AAED1	Q7RTV5	226 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	SERPINA11	Q86U17	422 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	CLIP4	Q8N3C7	705 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	OR9K2	Q8NGE7	335 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	LRRC8C	Q8TDW0	803 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	MAL2	Q969L2	176 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	RADIL	Q96JH8	1075 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	ADAM19	Q9H013	955 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	SLCO5A1	Q9H2Y9	848 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	SLC7A10	Q9NS82	523 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	MGAT4B	Q9UQ53	548 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	ATP23	Q9Y6H3	246 aa		11.96	□□□□□ -0.49
LIMK2-208	ENST00000467301	CR1	P17927	2039 aa		11.96	□□□□□ -0.5
LIMK2-208	ENST00000467301	ABCA2	Q9BZC7	2435 aa		11.96	□□□□□ -0.5
LIMK2-208	ENST00000467301	JMJD1C	Q15652	2540 aa		11.95	□□□□□ -0.5
LIMK2-208	ENST00000467301		A0A0G2JPF8	293 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms