RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MTMR9Q96QG7 549 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 MYCBPQ99417 103 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 ARHGDIGQ99819 225 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 EBF4Q9BQW3 602 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 TCHPQ9BT92 498 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 YTHDF1Q9BYJ9 559 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 AZI2Q9H6S1 392 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 BFARQ9NZS9 450 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 SEC14L3Q9UDX4 400 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 TMCO1Q9UM00 188 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 IFT52Q9Y366 437 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 UGT2A1Q9Y4X1 527 aa3.13□□□□□ -1.91
CDC42BPA-211ENST00000466538 IGHV1OR21-1A0A087WYE8 117 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 TCRBV9S1A1TA0A576 114 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 NDUFB10O96000 172 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 TIMP1P01033 207 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 NCK1P16333 377 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZBTB25P24278 435 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 OPRD1P41143 372 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 ATP1B3P54709 279 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 RPS8P62241 208 aaKnown RBP3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 ORC2Q13416 577 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 GRB7Q14451 532 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 DUSP7Q16829 419 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 MICBQ29980 383 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 PARP15Q460N3 678 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 PHYHD1Q5SRE7 291 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 C1orf146Q5VVC0 180 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 FAM220AQ7Z4H9 259 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 NANOGNBQ7Z5D8 188 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 DHDDSQ86SQ9 333 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 NBPF5PQ86XG9 351 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZNF584Q8IVC4 421 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 C11orf42Q8N5U0 333 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 ALLCQ8N6M5 410 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR52H1Q8NGJ2 320 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR8J1Q8NGP2 316 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 BRSK1Q8TDC3 778 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 C7orf33Q8WU49 177 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 CHCHD10Q8WYQ3 142 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 TM4SF19Q96DZ7 209 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 RNF2Q99496 336 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 GON7Q9BXV9 100 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 RBKSQ9H477 322 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZNF639Q9UID6 485 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 V9GY05 133 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 TTC21BQ7Z4L5 1316 aa3.12□□□□□ -1.91
CDC42BPA-211ENST00000466538 A0A1B0GVL5 298 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 CCDC169A6NNP5 214 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 LOC110117498-PIK3R3F6TDL0 507 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 UBXN8O00124 270 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 HDAC3O15379 428 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 STAMBPO95630 424 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 SLC2A3P11169 496 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 GYG1P46976 350 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 SEC61GP60059 68 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 LYZP61626 148 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 CSNK1G2P78368 415 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 TLE4Q04727 773 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 SSX2Q16385 188 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 CARD16Q5EG05 197 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 CTSL3PQ5NE16 218 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR2A2Q6IF42 318 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 TAS2R42Q7RTR8 314 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 H2BFWTQ7Z2G1 175 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 NECAB1Q8N987 351 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 NKAPP1Q8N9T2 125 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR4K14Q8NGD5 310 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR51S1Q8NGJ8 323 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 OR52I1Q8NGK6 324 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 ZNF564Q8TBZ8 553 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 UFD1Q92890 307 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 FBXO32Q969P5 355 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 MARC2Q969Z3 335 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 NUS1Q96E22 293 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 TIMD4Q96H15 378 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 IFT74Q96LB3 600 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 POLR2J2Q9GZM3 115 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 POLR2J3Q9H1A7 115 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 THUMPD1Q9NXG2 353 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 TREM2Q9NZC2 230 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 ADAM22Q9P0K1 906 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 KIF25Q9UIL4 384 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 RRP15Q9Y3B9 282 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 FANCIQ9NVI1 1328 aa3.11□□□□□ -1.91
CDC42BPA-211ENST00000466538 ARHGAP23Q9P227 1491 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 ABCA7Q8IZY2 2146 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 IGHV3OR16-13A0A075B7E8 117 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 IGKV1D-8A0A087WSZ0 117 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 XKRY2A2RUG3 117 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 TRIM64CA6NLI5 447 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 HSD17B6O14756 317 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 MMP23AO75900 390 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 KLK3P07288 261 aaPredicted RBP3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 NCF2P19878 526 aaPredicted RBP3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 TBPP20226 339 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 NPR2P20594 1047 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 CD1CP29017 333 aa3.1□□□□□ -1.91
CDC42BPA-211ENST00000466538 HTR1FP30939 366 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms