RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CBLN3Q6UW01 205 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 SIRT6Q8N6T7 355 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 TCEANCQ8N8B7 351 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 PMM1Q92871 262 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 EXOSC4Q9NPD3 245 aaKnown RBP16.99■□□□□ 0.31
CAPN3-209ENST00000466222 ISYNA1Q9NPH2 558 aa16.99■□□□□ 0.31
CAPN3-209ENST00000466222 IQCMA0A1B0GVH7 501 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 HPP00738 406 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 CSTAP01040 98 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 HPGDP15428 266 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 TBXA2RP21731 343 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 PNLIPRP2P54317 469 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 PSMD4P55036 377 aaKnown RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 RUNX1T1Q06455 604 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 ZNF524Q96C55 264 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 SCNM1Q9BWG6 230 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 POLR2J2Q9GZM3 115 aaKnown RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 TRIM45Q9H8W5 580 aaPredicted RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 MOV10Q9HCE1 1003 aaKnown RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 MRPS18AQ9NVS2 196 aaKnown RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 MRTO4Q9UKD2 239 aaKnown RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 CARD8Q9Y2G2 431 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 SCDO00767 359 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 AP3D1O14617 1153 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 PPM1BO75688 479 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 IFNGR2P38484 337 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 SOX3P41225 446 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 CRYBB2P43320 205 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 SMSP52788 366 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 FNDC7Q5VTL7 733 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 CCBE1Q6UXH8 406 aaPredicted RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 POGLUT1Q8NBL1 392 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 OR10G3Q8NGC4 313 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 OR4K5Q8NGD3 323 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 PHOSPHO1Q8TCT1 267 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 GRHL3Q8TE85 626 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 MCHR1Q99705 422 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 PRRG3Q9BZD7 231 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.98■□□□□ 0.31
CAPN3-209ENST00000466222 MAN2C1Q9NTJ4 1040 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 SACM1LQ9NTJ5 587 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 ANKRD10Q9NXR5 420 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 GRIP1Q9Y3R0 1128 aa16.98■□□□□ 0.31
CAPN3-209ENST00000466222 CEP295Q9C0D2 2601 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 OR6C70A6NIJ9 312 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 NKX2-8O15522 239 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 SCO2O43819 266 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 TNFSF8P32971 234 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 ACAA2P42765 397 aaKnown RBP16.97■□□□□ 0.31
CAPN3-209ENST00000466222 CDK5Q00535 292 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 EIPR1Q53HC9 387 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 ZNF468Q5VIY5 522 aaPredicted RBP16.97■□□□□ 0.31
CAPN3-209ENST00000466222 GDPD3Q7L5L3 318 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 BRIX1Q8TDN6 353 aaKnown RBP16.97■□□□□ 0.31
CAPN3-209ENST00000466222 KIAA1143Q96AT1 154 aaPredicted RBP16.97■□□□□ 0.31
CAPN3-209ENST00000466222 NACC2Q96BF6 587 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 KCNS3Q9BQ31 491 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 GALNT9Q9HCQ5 603 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 TVP23BQ9NYZ1 205 aa16.97■□□□□ 0.31
CAPN3-209ENST00000466222 ADAM10O14672 748 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 FADS1O60427 444 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 IL1AP01583 271 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 PRKAR1AP10644 381 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 GIPRP48546 466 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 GINS1Q14691 196 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 OR5M10Q6IEU7 315 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 IL20RBQ6UXL0 311 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 RPS19BP1Q86WX3 136 aaKnown RBP16.96■□□□□ 0.31
CAPN3-209ENST00000466222 PSMF1Q92530 271 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 SDHCQ99643 169 aaPredicted RBP16.96■□□□□ 0.31
CAPN3-209ENST00000466222 HOXD1Q9GZZ0 328 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 ANKRD19PQ9H560 264 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 TESQ9UGI8 421 aaKnown RBP16.96■□□□□ 0.31
CAPN3-209ENST00000466222 CLEC2DQ9UHP7 191 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 WASF3Q9UPY6 502 aa16.96■□□□□ 0.31
CAPN3-209ENST00000466222 B4DXG7 233 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 CTDSP2O14595 271 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 IGFBP1P08833 259 aaPredicted RBP16.96■□□□□ 0.3
CAPN3-209ENST00000466222 CPEP16870 476 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 EVI2BP34910 448 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 RPS19P39019 145 aaKnown RBP16.96■□□□□ 0.3
CAPN3-209ENST00000466222 TAS2R41P59536 307 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 EFNB1P98172 346 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 CHAF1BQ13112 559 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 CLN3Q13286 438 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 DCAF10Q5QP82 559 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 ZER1Q7Z7L7 766 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 PHC2Q8IXK0 858 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 CLDN22Q8N7P3 220 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF527Q8NB42 609 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 OR52I1Q8NGK6 324 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 GNPDA2Q8TDQ7 276 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 FGF11Q92914 225 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 HGDQ93099 445 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 THOC3Q96J01 351 aaKnown RBP16.96■□□□□ 0.3
CAPN3-209ENST00000466222 FGF20Q9NP95 211 aaPredicted RBP16.96■□□□□ 0.3
CAPN3-209ENST00000466222 HRH3Q9Y5N1 445 aa16.96■□□□□ 0.3
CAPN3-209ENST00000466222 HTR3EA5X5Y0 456 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 PRKYO43930 277 aa16.95■□□□□ 0.3
CAPN3-209ENST00000466222 F10P00742 488 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms