RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-225	ENST00000465158	SRD5A2	P31213	254 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	CD96	P40200	585 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	EIF2S3	P41091	472 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	GSS	P48637	474 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SMS	P52788	366 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	AQP4	P55087	323 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	FOXL2	P58012	376 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	ARG2	P78540	354 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TEK	Q02763	1124 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SELENBP1	Q13228	472 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TOP3A	Q13472	1001 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TUBA3C	Q13748	450 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	QPRT	Q15274	297 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	CD226	Q15762	336 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC36A3	Q495N2	470 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	ZNF770	Q6IQ21	691 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC25A25	Q6KCM7	469 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	C3orf33	Q6P1S2	294 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TUBA3E	Q6PEY2	450 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	IGFL2	Q6UWQ7	119 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	IGFL3	Q6UXB1	125 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	CASP12	Q6UXS9	341 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	APOOL	Q6UXV4	268 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	OLIG3	Q7RTU3	272 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	MAMDC2	Q7Z304	686 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC22A16	Q86VW1	577 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	RBM45	Q8IUH3	476 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	EPHX4	Q8IUS5	362 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	LACC1	Q8IV20	430 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	C8orf59	Q8N0T1	100 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	ZADH2	Q8N4Q0	377 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	FADS6	Q8N9I5	356 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	OR4D11	Q8NGI4	311 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TEX47	Q8TBZ9	253 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	CYGB	Q8WWM9	190 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	FAM168A	Q92567	244 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TFAP2C	Q92754	450 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	C3orf49	Q96BT1	292 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	NTNG2	Q96CW9	530 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	RNF31	Q96EP0	1072 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	C1GALT1C1	Q96EU7	318 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SH3YL1	Q96HL8	342 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	NAF1	Q96HR8	494 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	HRASLS5	Q96KN8	279 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC38A2	Q96QD8	506 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	MYCBP	Q99417	103 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SMAD5	Q99717	465 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC29A1	Q99808	456 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	ADI1	Q9BV57	179 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TAPBPL	Q9BX59	468 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	GABARAPL3	Q9BY60	117 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	KRTAP4-11	Q9BYQ6	195 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	WNT10A	Q9GZT5	417 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	FKRP	Q9H9S5	495 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	LIN28A	Q9H9Z2	209 aa	Known RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	MAN2C1	Q9NTJ4	1040 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	MED17	Q9NVC6	651 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	FAM118A	Q9NWS6	357 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	PAQR5	Q9NXK6	330 aa	Predicted RBP	6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	IL20	Q9NYY1	176 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	CHRNA9	Q9UGM1	479 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TRAPPC4	Q9Y296	219 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	HDGFL3	Q9Y3E1	203 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	ZNF337	Q9Y3M9	751 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	CORIN	Q9Y5Q5	1042 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	AP4B1	Q9Y6B7	739 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	SPEG	Q15772	3267 aa		6.07	□□□□□ -1.44
RBM39-225	ENST00000465158	TMED7-TICAM2	A0A0A6YYA0	188 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	CENPVL1	A0A0U1RR11	272 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	IRGM	A1A4Y4	181 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	UNC119B	A6NIH7	251 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	EFCAB9	A8MZ26	197 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158		H3BN98	237 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	NKX2-8	O15522	239 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SEC14L5	O43304	696 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	FRS3	O43559	492 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	NME2P1	O60361	137 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	EIF1B	O60739	113 aa	Known RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	TRIM3	O75382	744 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	AHSA1	O95433	338 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	WDPCP	O95876	746 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	GAST	P01350	101 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SAG	P10523	405 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	PRKAR1A	P10644	381 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SFTPC	P11686	197 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	IFI30	P13284	250 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	PRG2	P13727	222 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	PRKCA	P17252	672 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	PRKACG	P22612	351 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	MYF6	P23409	242 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	CHM	P24386	653 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	DPP4	P27487	766 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	HTR2A	P28223	471 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	GTF2E2	P29084	291 aa	Known RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	TACR3	P29371	465 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	OMP	P47874	163 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	DAP	P51397	102 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	CCL11	P51671	97 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	IST1	P53990	364 aa		6.06	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms