RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 PPP2R2CQ9Y2T4 447 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 AMDHD2Q9Y303 409 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 SNX24Q9Y343 169 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 GRIP1Q9Y3R0 1128 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 SLC25A15Q9Y619 301 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 NOTCH1P46531 2555 aa4.39□□□□□ -1.71
BRCA1-206ENST00000461574 CCDC151A5D8V7 595 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF724A8MTY0 619 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 MYO1GB0I1T2 1018 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 B4DSR2 109 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 MANBAO00462 879 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 EIF3HO15372 352 aaKnown RBP eCLIP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 PDPK1O15530 556 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ULK1O75385 1050 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 MRPL33O75394 65 aaKnown RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 SLU7O95391 586 aaKnown RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CRYAAP02489 173 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 NGFRP08138 427 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 GSTA2P09210 222 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 RBP1P09455 135 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ALOX5P09917 674 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 LINGO3P0C6S8 592 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CTAGE8P0CG41 777 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 TFPIP10646 304 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 PRPS2P11908 318 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CDH2P19022 906 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 DDCP20711 480 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 IL2RGP31785 369 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 SERPINF1P36955 418 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 RPS19P39019 145 aaKnown RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 IDH3GP51553 393 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 P2RX1P51575 399 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CDH13P55290 713 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CSNK2A1P68400 391 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 IL13RA1P78552 427 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 TGFBR3Q03167 851 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF117Q03924 483 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 NAB1Q13506 487 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 RASA2Q15283 850 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CD226Q15762 336 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 PDCD2Q16342 344 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 IMPG1Q17R60 797 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 AWAT1Q58HT5 328 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 TEX35Q5T0J7 233 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CCNJQ5T5M9 372 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CASP12Q6UXS9 341 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 RPS27LQ71UM5 84 aaKnown RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF627Q7L945 461 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CTAGE4Q8IX94 777 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 SLC35F6Q8N357 371 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 SVOPLQ8N434 492 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CDRT4Q8N9R6 151 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 OR6Y1Q8NGX8 325 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ZFP28Q8NHY6 868 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 METTL6Q8TCB7 284 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF483Q8TF39 744 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 WDR60Q8WVS4 1066 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 MRPL24Q96A35 216 aaKnown RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ELP4Q96EB1 424 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 OTUB1Q96FW1 271 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 APIPQ96GX9 242 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 MRGPRX4Q96LA9 322 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 AMDHD1Q96NU7 426 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 DPH5Q9H2P9 285 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 GLIPR2Q9H4G4 154 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 NARFLQ9H6Q4 476 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF696Q9H7X3 374 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 LPAR2Q9HBW0 351 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 DYNLRB1Q9NP97 96 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 SERINC1Q9NRX5 453 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CA10Q9NS85 328 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 GIN1Q9NXP7 522 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 FBXO9Q9UK97 447 aaPredicted RBP4.38□□□□□ -1.71
BRCA1-206ENST00000461574 SNX12Q9UMY4 172 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 USP22Q9UPT9 525 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 CARD8Q9Y2G2 431 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 PCDHGB1Q9Y5G3 927 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 TRRAPQ9Y4A5 3859 aa4.38□□□□□ -1.71
BRCA1-206ENST00000461574 NBEAL2Q6ZNJ1 2754 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 TRAV20A0A0B4J274 112 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 A0A1W2PQD3 144 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 SH3PXD2BA1X283 911 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 SERINC4A6NH21 518 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 VSTM5A8MXK1 200 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 B9A039 149 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 SULT2B1O00204 365 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 GPR171O14626 319 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 PEX14O75381 377 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 SKAP2O75563 359 aaPredicted RBP4.37□□□□□ -1.71
BRCA1-206ENST00000461574 KRT33AO76009 404 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 SUPT7LO94864 414 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 KCNK2O95069 426 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 NKX2-2O95096 273 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 PSMG1O95456 288 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 STAMBPO95630 424 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 HSPA4LO95757 839 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 BCL10O95999 233 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 RPS17P08708 135 aaKnown RBP4.37□□□□□ -1.71
BRCA1-206ENST00000461574 TACSTD2P09758 323 aa4.37□□□□□ -1.71
BRCA1-206ENST00000461574 OR4A8P0C604 315 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms