RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 NET1Q7Z628 596 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 CXorf67Q86X51 503 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 CDC20BQ86Y33 519 aa16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 POU5F2Q8N7G0 328 aa16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 STEAP2Q8NFT2 490 aa16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 STK35Q8TDR2 534 aa16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 DNAJA4Q8WW22 397 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 SLC25A36Q96CQ1 311 aa16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 ADPRHL2Q9NX46 363 aa16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 TESQ9UGI8 421 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-215ENST00000456545 FAM221AA4D161 298 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 GMNCA6NCL1 334 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 MRPL33O75394 65 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 OPN1SWP03999 348 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 PNMTP11086 282 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 PCGF2P35227 344 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 OR3A2P47893 321 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 DMTNQ08495 405 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 VMACQ2NL98 169 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 ALG10BQ5I7T1 473 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 ABLIM2Q6H8Q1 611 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 ULK3Q6PHR2 472 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 PAQR6Q6TCH4 344 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 ATG4DQ86TL0 474 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 LSMEM1Q8N8F7 131 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 RASSF5Q8WWW0 418 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 RCN3Q96D15 328 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 SLC47A1Q96FL8 570 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 ACTR6Q9GZN1 396 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 PARPBPQ9NWS1 579 aa16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 C6orf203Q9P0P8 240 aaPredicted RBP16.05■□□□□ 0.16
PDLIM2-215ENST00000456545 A0A1B0GWA3 101 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 LIPT2A6NK58 231 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 AIM2O14862 343 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 AKR7A3O95154 331 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 COX4I1P13073 169 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 PSMB1P20618 241 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 PCBP3P57721 371 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 GNGT1P63211 74 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 P2RY6Q15077 328 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 OR1Q1Q15612 314 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 ERICH5Q6P6B1 374 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 GPAT4Q86UL3 456 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 NRGNQ92686 78 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 KISS1RQ969F8 398 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 APH1AQ96BI3 265 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 PIK3IP1Q96FE7 263 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 MCHR1Q99705 422 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 PRR14Q9BWN1 585 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 C12orf10Q9HB07 376 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 PRSS50Q9UI38 385 aa16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 ING1Q9UK53 422 aaPredicted RBP16.04■□□□□ 0.16
PDLIM2-215ENST00000456545 MAST4O15021 2626 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 IGKV3D-15A0A087WSY6 115 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 ZNF716A6NP11 495 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 LGI1O95970 557 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 IFNA14P01570 189 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 C8BP07358 591 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 CRYGSP22914 178 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 CCKARP32238 428 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 LSP1P33241 339 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 RPS5P46782 204 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 GYS2P54840 703 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 H3F3AP84243 136 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 ITGADQ13349 1161 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 DUSP7Q16829 419 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 SFRP5Q5T4F7 317 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 FAM91A1Q658Y4 838 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 Q6ZT83 130 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 WFDC8Q8IUA0 241 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 GABRG1Q8N1C3 465 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 TMEM99Q8N816 258 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 VANGL1Q8TAA9 524 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 OR10A4Q9H209 315 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 EFCAB1Q9HAE3 211 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 UPB1Q9UBR1 384 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 SLC9A8Q9Y2E8 581 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 AP3M1Q9Y2T2 418 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 APCP25054 2843 aa16.03■□□□□ 0.16
PDLIM2-215ENST00000456545 DCHS2Q6V1P9 2916 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 ZNF814B7Z6K7 855 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 M0R3H8 397 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 DYNC1I1O14576 645 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 OR2T1O43869 369 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 RAMP1O60894 148 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 HRGP04196 525 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 DNASE1P24855 282 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 HTR2AP28223 471 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 DNAJA1P31689 397 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 GZMMP51124 257 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 SLC16A1P53985 500 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 TSC22D1Q15714 1073 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 C5orf46Q6UWT4 87 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 CASP12Q6UXS9 341 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 BHLHA15Q7RTS1 189 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 COMTD1Q86VU5 262 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 LSRQ86X29 649 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 MFSD8Q8NHS3 518 aa16.02■□□□□ 0.16
PDLIM2-215ENST00000456545 PROX1Q92786 737 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms