RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 PROB1E7EW31 1015 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 SUSD5O60279 629 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 NPIPB7O75200 414 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 CEACAM1P13688 526 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 MTNR1AP48039 350 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 LTBQ06643 244 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 ZNF362Q5T0B9 420 aaPredicted RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 RNLSQ5VYX0 342 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 C5orf46Q6UWT4 87 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 CXXC5Q7LFL8 322 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 STK35Q8TDR2 534 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 NKD1Q969G9 470 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 CRELD1Q96HD1 420 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 GPX7Q96SL4 187 aaPredicted RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 DOK1Q99704 481 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 SH2D2AQ9NP31 389 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 HINT3Q9NQE9 182 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 CHRNA9Q9UGM1 479 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 WARS2Q9UGM6 360 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 TMEM72A0PK05 275 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 MCIDASD6RGH6 385 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 TM4SF5O14894 197 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 TRMUO75648 421 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 LCKP06239 509 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 ADRA2AP08913 450 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 HK1P19367 917 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 NOS3P29474 1203 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 RBMS1P29558 406 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 HTR1FP30939 366 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 APOBEC1P41238 236 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 RPS5P46782 204 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 ST13P50502 369 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 TMBIM6P55061 237 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 CDH11P55287 796 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 ARSKQ6UWY0 536 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 MARCH9Q86YJ5 346 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 GID4Q8IVV7 300 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 ADAMTS17Q8TE56 1095 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 PAQR8Q8TEZ7 354 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 NMD3Q96D46 503 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 LGALS12Q96DT0 336 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 RNFT2Q96EX2 444 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 TAPBPLQ9BX59 468 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 ANGPTL4Q9BY76 406 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 YIPF3Q9GZM5 350 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 NRIP3Q9NQ35 241 aa12.93□□□□□ -0.34
USP39-207ENST00000450066 H2AFY2Q9P0M6 372 aaPredicted RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 DIMT1Q9UNQ2 313 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 MRPS18BQ9Y676 258 aaKnown RBP12.93□□□□□ -0.34
USP39-207ENST00000450066 ZC3H12DA2A288 527 aaKnown RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 CDRT15L2A8MXV6 281 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 M0R3G1 203 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 ARPC3O15145 178 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 IDH3BO43837 385 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 MT-ATP6P00846 226 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 IFNGP01579 166 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 BGLAPP02818 100 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 ADORA3P0DMS8 318 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 ZNF3P17036 446 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PSMB9P28065 219 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 UQCRC1P31930 480 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 RPL4P36578 427 aaKnown RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 ZNF41P51814 821 aaPredicted RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 MAP2K6P52564 334 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 ATP1A4Q13733 1029 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 SLC25A53Q5H9E4 307 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PLBD1Q6P4A8 553 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 ALDH16A1Q8IZ83 802 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 WDSUB1Q8N9V3 476 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 BBS1Q8NFJ9 593 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 OR52I1Q8NGK6 324 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 NTNG2Q96CW9 530 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 SGCZQ96LD1 299 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 IP6K3Q96PC2 410 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 ERMAPQ96PL5 475 aaPredicted RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 HPF1Q9NWY4 346 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 HRH3Q9Y5N1 445 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PCNX3Q9H6A9 2034 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PCSK5Q92824 1860 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 FAM183AA6NL82 134 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PRR23D1E9PI22 279 aaPredicted RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 BLOC1S5-TXNDC5H3BN57 136 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 RAB36O95755 333 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PTHP01270 115 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 HIST1H2ABP04908 130 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 PRR23D2P0DMB1 279 aaPredicted RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 ITGADQ13349 1161 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 FAM69AQ5T7M9 428 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 C1orf140Q5VVS0 124 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 SLC22A10Q63ZE4 541 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 JMJD6Q6NYC1 403 aaPredicted RBP12.92□□□□□ -0.34
USP39-207ENST00000450066 B3GNT6Q6ZMB0 384 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 HIST3H2AQ7L7L0 130 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 DTX1Q86Y01 620 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 IL22RA1Q8N6P7 574 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 FADS6Q8N9I5 356 aa12.92□□□□□ -0.34
USP39-207ENST00000450066 OR2M3Q8NG83 312 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms