RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SLC5A10A0PJK1 596 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 GRXCR1A8MXD5 290 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 LRRN3E7EW58 273 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 APEHP13798 732 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 STAT5AP42229 794 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 BDH1Q02338 343 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 TMEM115Q12893 351 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 DYRK1AQ13627 763 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF385BQ569K4 471 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 SLC30A6Q6NXT4 461 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 LCTLQ6UWM7 567 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 GLDNQ6ZMI3 551 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 MISPQ8IVT2 679 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 SFTPA1Q8IWL2 248 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 XAGE5Q8WWM1 108 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 GAS2L1Q99501 681 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 GINS4Q9BRT9 223 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 LRRN3Q9H3W5 708 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 METTL1Q9UBP6 276 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 ADAM29Q9UKF5 820 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 OIP5O43482 229 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 LIMS3P0CW19 117 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 LIMS4P0CW20 117 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 NFYBP25208 207 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 KLF9Q13886 244 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 C18orf63Q68DL7 685 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 ADNP2Q6IQ32 1131 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 PRICKLE2Q7Z3G6 844 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 RNF175Q8N4F7 328 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 C12orf76Q8N812 135 aaPredicted RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR52L1Q8NGH7 329 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 RNASE11Q8TAA1 199 aaKnown RBP12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 PNPLA2Q96AD5 504 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 RGMAQ96B86 450 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 TLNRD1Q9H1K6 362 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 HEXAP06865 529 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR12D1P0DN82 309 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF44P15621 663 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 MPGP29372 298 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 TGM3Q08188 693 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 SLC38A5Q8WUX1 472 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 PBX4Q9BYU1 374 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 SLC6A16Q9GZN6 736 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 TRPV4Q9HBA0 871 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 OPN4Q9UHM6 478 aa12.45□□□□□ -0.42
SYNGAP1-204ENST00000449372 UBL3O95164 117 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 MTNR1BP49286 362 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 RAB2AP61019 212 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 PRSS45Q7RTY3 260 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 IQCHQ86VS3 1027 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR6V1Q8N148 313 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR56A1Q8NGH5 318 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR51Q1Q8NH59 317 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 CXorf40AQ8TE69 158 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 HMGB4Q8WW32 186 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 KCNK12Q9HB15 430 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 GPN1Q9HCN4 374 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 ANHXE9PGG2 379 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 RGS9O75916 674 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 CA3P07451 260 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 FOLR2P14207 255 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 NOS3P29474 1203 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 THBS2P35442 1172 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 BUD31P41223 144 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 ENTPD8Q5MY95 495 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 TPRA1Q86W33 373 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 C7orf61Q8IZ16 206 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 ARRDC3Q96B67 414 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR1F2PQ96R84 312 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 GGACTQ9BVM4 153 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 PINK1Q9BXM7 581 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 TCF7L1Q9HCS4 588 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 TRIM36Q9NQ86 728 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF879B4DU55 563 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 SYT5O00445 386 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 PGRMC2O15173 223 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 YY2O15391 372 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 C1orf105O95561 183 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 ADH1CP00326 375 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 UBBP0CG47 229 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 UBCP0CG48 685 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 TRHRP34981 398 aaPredicted RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 RPS27AP62979 156 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 UBA52P62987 128 aaKnown RBP12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 TCTN3Q6NUS6 607 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF852Q6ZMS4 543 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 CDK20Q8IZL9 346 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 SLC43A2Q8N370 569 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 OR10H5Q8NGA6 315 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 ZNF480Q8WV37 535 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 DTD2Q96FN9 168 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 SGPP1Q9BX95 441 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 NOX3Q9HBY0 568 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 PCDHB10Q9UN67 800 aa12.44□□□□□ -0.42
SYNGAP1-204ENST00000449372 COLCA2A8K830 154 aa12.43□□□□□ -0.42
SYNGAP1-204ENST00000449372 AGR2O95994 175 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms