RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ZNF684Q5T5D7 378 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 EPGNQ6UW88 154 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 SIRT2Q8IXJ6 389 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ENTHD1Q8IYW4 607 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 OR2D3Q8NGH3 330 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 TTYH3Q9C0H2 523 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 CAMSAP1Q5T5Y3 1602 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 C1orf226A1L170 272 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 OOEPA6NGQ2 149 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 OR1E2P47887 323 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 PPP1CBP62140 327 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 C6orf201Q7Z4U5 140 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 METTL17Q9H7H0 456 aaPredicted RBP8.4□□□□□ -1.06
NIPBL-202ENST00000448238 CNTNAP1P78357 1384 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 A6NIN4 97 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 EMP2P54851 167 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 RPS15AP62244 130 aaKnown RBP8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ERHP84090 104 aaKnown RBP8.4□□□□□ -1.06
NIPBL-202ENST00000448238 PLEKHS1Q5SXH7 462 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 HES3Q5TGS1 186 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 OR2G3Q8NGZ4 309 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 HMCESQ96FZ2 354 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ABHD6Q9BV23 337 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 CD244Q9BZW8 370 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 RIOX1Q9H6W3 641 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 OBP2BQ9NPH6 170 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ZDHHC2Q9UIJ5 367 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 PCDHGC4Q9Y5F7 938 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 ZFYVE16Q7Z3T8 1539 aa8.4□□□□□ -1.06
NIPBL-202ENST00000448238 TOX3O15405 576 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-202ENST00000448238 RFX2P48378 723 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 FBXO48Q5FWF7 155 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 ASB13Q8WXK3 278 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 ANAPC16Q96DE5 110 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 TRIB3Q96RU7 358 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 WWTR1Q9GZV5 400 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 MTHFD2LQ9H903 347 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-202ENST00000448238 TOPBP1Q92547 1522 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 NANOGP8Q6NSW7 305 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 H2BFWTQ7Z2G1 175 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 PRICKLE2Q7Z3G6 844 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 OR4A4PQ8NGN8 299 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 OR4F5Q8NH21 305 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 TLCD1Q96CP7 247 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 OR4F4Q96R69 305 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 ATP5SQ99766 215 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 SDCBP2Q9H190 292 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 P4HTMQ9NXG6 502 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 ETV7Q9Y603 341 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 WNK2Q9Y3S1 2297 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 TDRD6O60522 2096 aaKnown RBP8.4□□□□□ -1.07
NIPBL-202ENST00000448238 LIPCP11150 499 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF816Q0VGE8 651 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-202ENST00000448238 ADIPOQQ15848 244 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 DHRS7BQ6IAN0 325 aaPredicted RBP8.4□□□□□ -1.07
NIPBL-202ENST00000448238 PAQR3Q6TCH7 311 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 SGPP1Q9BX95 441 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 DPH1Q9BZG8 443 aa8.4□□□□□ -1.07
NIPBL-202ENST00000448238 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 NRP1O14786 923 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SLC6A12P48065 614 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 DLX1P56177 255 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 NFATC2Q13469 925 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 MFSD12Q6NUT3 480 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 PLPPR4Q7Z2D5 763 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ERASQ7Z444 233 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SLC35F2Q8IXU6 374 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ZFP90Q8TF47 636 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ARRDC3Q96B67 414 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 PDCD2LQ9BRP1 358 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF446Q9NWS9 450 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SOX21Q9Y651 276 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SHANK2Q9UPX8 1470 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 PXDNLA1KZ92 1463 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SPATA31C2B4DYI2 1134 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SCO2O43819 266 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ASGR2P07307 311 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 G6PDP11413 515 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 NME2P22392 152 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 DGKEP52429 567 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OR4D2P58180 307 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 RAB40BQ12829 278 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 RTL8BQ17RB0 113 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 BEX5Q5H9J7 111 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 PLBD1Q6P4A8 553 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM239Q8WW34 195 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 KCNE4Q8WWG9 221 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 TLR9Q9NR96 1032 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 SLC22A13Q9Y226 551 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 ZFP37Q9Y6Q3 630 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 NPHP4O75161 1426 aaPredicted RBP8.39□□□□□ -1.07
NIPBL-202ENST00000448238 CLDN5O00501 218 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 LDB2O43679 373 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 B4GALT4O60513 344 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 UFM1P61960 85 aa8.39□□□□□ -1.07
NIPBL-202ENST00000448238 LTB4RQ15722 352 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms