RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ING1Q9UK53 422 aaPredicted RBP14.32□□□□□ -0.12
USP39-205ENST00000442708 MCTS1Q9ULC4 181 aaKnown RBP14.32□□□□□ -0.12
USP39-205ENST00000442708 CLEC4AQ9UMR7 237 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 V9GYQ6 96 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 HCFC1P51610 2035 aa14.32□□□□□ -0.12
USP39-205ENST00000442708 HECTD1Q9ULT8 2610 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 SPTAN1Q13813 2472 aaKnown RBP14.31□□□□□ -0.12
USP39-205ENST00000442708 A0A1W2PNV4 684 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 A1L4Q6 167 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 NKX2-6A6NCS4 301 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 LIPT2A6NK58 231 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 J3KTA2 159 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 FFAR1O14842 300 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 RAMP1O60894 148 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 TNFSF13O75888 250 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 SEMG1P04279 462 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 PNMTP11086 282 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 AGAP20933 346 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 CTSSP25774 331 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 KIR2DL2P43627 348 aaPredicted RBP14.31□□□□□ -0.12
USP39-205ENST00000442708 YAP1P46937 504 aaKnown RBP14.31□□□□□ -0.12
USP39-205ENST00000442708 OR2B6P58173 313 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 TRIM25Q14258 630 aaKnown RBP14.31□□□□□ -0.12
USP39-205ENST00000442708 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
USP39-205ENST00000442708 PGM2L1Q6PCE3 622 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 CYP2R1Q6VVX0 501 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 FKBP9P1Q75LS8 142 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 LILRB4Q8NHJ6 448 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 STK35Q8TDR2 534 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 GEMIN6Q8WXD5 167 aaKnown RBP14.31□□□□□ -0.12
USP39-205ENST00000442708 SLC41A3Q96GZ6 507 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 C7orf34Q96L11 122 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 NSMCE2Q96MF7 247 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 CADM1Q9BY67 442 aaKnown RBP14.31□□□□□ -0.12
USP39-205ENST00000442708 TIGARQ9NQ88 270 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 COQ3Q9NZJ6 369 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 ACTR3BQ9P1U1 418 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 RIMS3Q9UJD0 308 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 RPS6KA6Q9UK32 745 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 A4GNTQ9UNA3 340 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 TRAPPC4Q9Y296 219 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 ICE1Q9Y2F5 2266 aa14.31□□□□□ -0.12
USP39-205ENST00000442708 TCRBV5S2A0A599 114 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 FAM90A27PA6NNH2 459 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 ACOT8O14734 319 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 CHP2O43745 196 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 GMNNO75496 209 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 FPR1P21462 350 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 BMP5P22003 454 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 IDUAP35475 653 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 RPS5P46782 204 aaKnown RBP14.3□□□□□ -0.12
USP39-205ENST00000442708 CSNK2A1P68400 391 aaPredicted RBP14.3□□□□□ -0.12
USP39-205ENST00000442708 H3F3AP84243 136 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 OR7A5Q15622 319 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 IQCCQ4KMZ1 466 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 DNAL1Q4LDG9 190 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 VWA1Q6PCB0 445 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 FCRLAQ7L513 359 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 NKAIN4Q8IVV8 208 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 CCDC103Q8IW40 242 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 ASB5Q8WWX0 329 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 TAAR8Q969N4 342 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 CCDC124Q96CT7 223 aaKnown RBP14.3□□□□□ -0.12
USP39-205ENST00000442708 ZFP3Q96NJ6 502 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 ZNF426Q9BUY5 554 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 PRRG4Q9BZD6 226 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 RHCGQ9UBD6 479 aa14.3□□□□□ -0.12
USP39-205ENST00000442708 SAMD4AQ9UPU9 718 aaKnown RBP14.3□□□□□ -0.12
USP39-205ENST00000442708 PTPN13Q12923 2485 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 FTCDNL1E5RQL4 147 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 GSC2O15499 205 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 CYTIPO60759 359 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 DNAJC8O75937 253 aaPredicted RBP14.29□□□□□ -0.12
USP39-205ENST00000442708 PRSS23O95084 383 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 OR5F1O95221 314 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 CLDN14O95500 239 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 IFNW1P05000 195 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 FCGR2AP12318 317 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 P2RY4P51582 365 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 TAS2R41P59536 307 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 SIRPAP78324 504 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 VLDLRP98155 873 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 LTBQ06643 244 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 FOXD4Q12950 439 aaPredicted RBP14.29□□□□□ -0.12
USP39-205ENST00000442708 ABLIM2Q6H8Q1 611 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 OR2A2Q6IF42 318 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 BTLAQ7Z6A9 289 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 CA5BP1Q8WTZ4 195 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 STARD4Q96DR4 205 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 PYURFQ96I23 114 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 PRRC1Q96M27 445 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 TMEM43Q9BTV4 400 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 MAN2C1Q9NTJ4 1040 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 SELENONQ9NZV5 590 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.29□□□□□ -0.12
USP39-205ENST00000442708 SEC14L4Q9UDX3 406 aa14.29□□□□□ -0.12
USP39-205ENST00000442708 ZNF629Q9UEG4 869 aaPredicted RBP14.29□□□□□ -0.12
USP39-205ENST00000442708 LRRN3E7EW58 273 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 C19orf84I3L1E1 186 aa14.28□□□□□ -0.12
USP39-205ENST00000442708 hCG_2039718K7EN88 272 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms