RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 ASAH2BP0C7U1 165 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 FAM157BP0CG42 384 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 PNLIPP16233 465 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 GLB1P16278 677 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 NPR2P20594 1047 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 RBMS1P29558 406 aaKnown RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 UQCRC1P31930 480 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 NR4A2P43354 598 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 TMED10P49755 219 aaKnown RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 DLX5P56178 289 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 TPTEP56180 551 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 RPS7P62081 194 aaKnown RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 COL9A2Q14055 689 aaPredicted RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 CDK5R1Q15078 307 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 SF3A2Q15428 464 aaKnown RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 ZNF74Q16587 644 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 PYDC2Q56P42 97 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 ZNF684Q5T5D7 378 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 SLC6A19Q695T7 634 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 GPR139Q6DWJ6 353 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 BAIAP2L2Q6UXY1 529 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 OVCH1Q7RTY7 1134 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 FAM122BQ7Z309 247 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 GATAD2AQ86YP4 633 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 SLC35F2Q8IXU6 374 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 CADM2Q8N3J6 435 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 FAM160A2Q8N612 972 aaPredicted RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 ZNF614Q8N883 585 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 ZNF441Q8N8Z8 693 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 SCAIQ8N9R8 606 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 OR52E2Q8NGJ4 325 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 OR6S1Q8NH40 331 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 DAZLQ92904 295 aaKnown RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 NACC2Q96BF6 587 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 C4orf36Q96KX1 117 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 TPSD1Q9BZJ3 242 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 TGIF2Q9GZN2 237 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 DUSP15Q9H1R2 295 aaPredicted RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 TIGARQ9NQ88 270 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 RBFOX1Q9NWB1 397 aaKnown RBP7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 ABRACLQ9P1F3 81 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 IER3IP1Q9Y5U9 82 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 RNF215Q9Y6U7 377 aa7.5□□□□□ -1.21
SPIRE1-204ENST00000440472 ZC3H12DA2A288 527 aaKnown RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 CD8B2A6NJW9 211 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ELOA3DA6NLF2 546 aaPredicted RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ALG1L2C9J202 215 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 MCIDASD6RGH6 385 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 SOX1O00570 391 aaPredicted RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 TSPAN2O60636 221 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 HPGDSO60760 199 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 OR2B3O76000 313 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 UTS2O95399 124 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ONECUT2O95948 504 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 TFP02787 698 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 UCHL1P09936 223 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 CD8BP10966 210 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 SPI1P17947 270 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 GRK6P43250 576 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 CENPAP49450 140 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 PGDP52209 483 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 SIRPAP78324 504 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ERV3-1Q14264 604 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ELOA3BQ3SY89 546 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 C5orf46Q6UWT4 87 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 MAMSTRQ6ZN01 415 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 CELF2-AS1Q8N7Q2 184 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 FAM98AQ8NCA5 519 aaKnown RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ELOA3Q8NG57 546 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 OR6F1Q8NGZ6 308 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ITFG2Q969R8 447 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 CTRCQ99895 268 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 MRI1Q9BV20 369 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 RBCK1Q9BYM8 510 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 C11orf54Q9H0W9 315 aaPredicted RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 FKRPQ9H9S5 495 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 INIPQ9NRY2 104 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ZNF275Q9NSD4 429 aaPredicted RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 COMMD3Q9UBI1 195 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 NOTOA8MTQ0 251 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 B4DXG7 233 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 E9PI62 339 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 J3QLW9 94 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 LRRTM2O43300 516 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 CDC40O60508 579 aaKnown RBP eCLIP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 PRKAR1AP10644 381 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 SLC2A2P11168 524 aaPredicted RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ZNF19P17023 458 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 SDHAP31040 664 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 MAP2K3P46734 347 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 PNLIPRP2P54317 469 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 OR12D2P58182 307 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 RPL6Q02878 288 aaKnown RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 CD300CQ08708 224 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 EBPQ15125 230 aaKnown RBP7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 ACSM3Q53FZ2 586 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 WDR45BQ5MNZ6 344 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 LINC01590Q5TEZ4 76 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 TRIQKQ629K1 86 aa7.49□□□□□ -1.21
SPIRE1-204ENST00000440472 SFXN4Q6P4A7 337 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms