RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 OR11G2Q8NGC1 345 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 THEM6Q8WUY1 208 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ARRDC3Q96B67 414 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 CPNE2Q96FN4 548 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 LMLNQ96KR4 655 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 C11orf49Q9H6J7 331 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 FKRPQ9H9S5 495 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 TRPV4Q9HBA0 871 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 LHX9Q9NQ69 397 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 WASH6PQ9NQA3 447 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 SCN10AQ9Y5Y9 1956 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 GXYLT2A0PJZ3 443 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ACOT7O00154 380 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 CACNB4O00305 520 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 SUSD5O60279 629 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ADH1AP07327 375 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 NMBP08949 121 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 GIPP09681 153 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZGLP1P0C6A0 271 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 HPGDP15428 266 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 PVALBP20472 110 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 VAMP1P23763 118 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 PRKAR1BP31321 381 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 CCR2P41597 374 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 RPS27P42677 84 aaKnown RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 RAB28P51157 221 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ACTA2P62736 377 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ACTG2P63267 376 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 SGCGQ13326 291 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 DYRK1AQ13627 763 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 KLF9Q13886 244 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 CBFBQ13951 182 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 KCNAB1Q14722 419 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 PRAMEF17Q5VTA0 474 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 TSSK4Q6SA08 328 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 JAZF1Q86VZ6 243 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 NRSN1Q8IZ57 195 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 MARVELD3Q96A59 401 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 TRIM43Q96BQ3 446 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 MOAP1Q96BY2 351 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 SLC38A3Q99624 504 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 OR52A5Q9H2C5 316 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZMAT3Q9HA38 289 aaKnown RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 CMC2Q9NRP2 79 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 PLEKHM1Q9Y4G2 1056 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 MYO9BQ13459 2157 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 VWA8A3KMH1 1905 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 A0A1B0GUH1 482 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 NAP1L6A6NFF2 107 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 TVP23AA6NH52 213 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 D6RAR5 112 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 GABARAPH6UMI1 98 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 NRG2O14511 850 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 VEGFDO43915 354 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 PRAMEF2O60811 474 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 SLC35G6P0C7Q6 338 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZNF888P0CJ79 500 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 NAGAP17050 411 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 HSD17B2P37059 387 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 LUMP51884 338 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 SKP1P63208 163 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 BDH1Q02338 343 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZNF85Q03923 595 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 GAS6Q14393 721 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 NKPD1Q17RQ9 610 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 TRMT12Q53H54 448 aaKnown RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 CCDC157Q569K6 752 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 OLFML2AQ68BL7 652 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 SLC48A1Q6P1K1 146 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ABHD17CQ6PCB6 329 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ATRAIDQ6UW56 229 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 KCTD9Q7L273 389 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 OR2L5Q8NG80 312 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 OR51S1Q8NGJ8 323 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 MARC2Q969Z3 335 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 PELI1Q96FA3 418 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 FOXN4Q96NZ1 517 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 MS4A4EQ96PG1 132 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 INSM2Q96T92 566 aaPredicted RBP8.36□□□□□ -1.07
COPB1-202ENST00000439561 SGIP1Q9BQI5 828 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 ULBP3Q9BZM4 244 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 FBXO34Q9NWN3 711 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 DEC1Q9P2X7 70 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 DPP7Q9UHL4 492 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 STON1Q9Y6Q2 735 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 SPACA6W5XKT8 324 aa8.36□□□□□ -1.07
COPB1-202ENST00000439561 LAMA3Q16787 3333 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 CASP8AP2Q9UKL3 1982 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 C13orf42A0A1B0GVH6 325 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 CCSO14618 274 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 SLC31A1O15431 190 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 EGFP01133 1207 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 APEHP13798 732 aaKnown RBP8.35□□□□□ -1.07
COPB1-202ENST00000439561 UGT2B7P16662 529 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 SP3Q02447 781 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 CDK5R1Q15078 307 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TMEM35AQ53FP2 167 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 ARHGAP11AQ6P4F7 1023 aa8.35□□□□□ -1.07
COPB1-202ENST00000439561 TMEM17Q86X19 198 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms