RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 NPAP1Q9NZP6 1156 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 ZNF232Q9UNY5 417 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 MGAT4BQ9UQ53 548 aa16.26■□□□□ 0.19
AC004540.1-201ENST00000439120 CDHR4A6H8M9 788 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 SHISA9B4DS77 424 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 GKN3PP0CG01 181 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 IMPDH2P12268 514 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 PTAFRP25105 342 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 H3F3AP84243 136 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 ZSWIM7Q19AV6 140 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 PGGHGQ32M88 737 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 OTUD3Q5T2D3 398 aaPredicted RBP16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 AGAP6Q5VW22 663 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 WBP2NLQ6ICG8 309 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 SLC22A25Q6T423 547 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 PAQR6Q6TCH4 344 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 ZNF836Q6ZNA1 936 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 OR52B2Q96RD2 323 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 TAPBPLQ9BX59 468 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 BARX1Q9HBU1 254 aaPredicted RBP16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 PRDM4Q9UKN5 801 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 ZNF443Q9Y2A4 671 aaPredicted RBP16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 FLVCR1Q9Y5Y0 555 aa16.25■□□□□ 0.19
AC004540.1-201ENST00000439120 NSD1Q96L73 2696 aaPredicted RBP16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 A0A1W2PR80 420 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 ZC3H12DA2A288 527 aaKnown RBP16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 M0R1B8 84 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 STX1BP61266 288 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 TGFBR3Q03167 851 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 CEACAM7Q14002 265 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 OR7A5Q15622 319 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 GABRA6Q16445 453 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 C9orf135Q5VTT2 229 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 GPAT4Q86UL3 456 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 SLC38A5Q8WUX1 472 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 VPS33AQ96AX1 596 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 AURKBQ96GD4 344 aaPredicted RBP16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 TRAF4Q9BUZ4 470 aaPredicted RBP16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 ADAM19Q9H013 955 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 RAD21L1Q9H4I0 556 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 TMBIM4Q9HC24 238 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 SLC25A15Q9Y619 301 aa16.24■□□□□ 0.19
AC004540.1-201ENST00000439120 DSPPQ9NZW4 1301 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 A0A0G2JPF8 293 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 FAM234BA2RU67 622 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 HNRNPCL2B2RXH8 293 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 HNRNPCL3B7ZW38 293 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 INAFM1C9JVW0 142 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 RNF223E7ERA6 249 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 HNRNPCL1O60812 293 aaKnown RBP16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 AKR7A3O95154 331 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 THBS1P07996 1170 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 TFPTP0C1Z6 253 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 HNRNPCL4P0DMR1 293 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 NTF4P34130 210 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 MVDP53602 400 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 SLC17A1Q14916 467 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 MAPK11Q15759 364 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 GTDC1Q4AE62 458 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 RPS26P11Q5JNZ5 115 aaPredicted RBP16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 RNF220Q5VTB9 566 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 KLHL24Q6TFL4 600 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 MAVSQ7Z434 540 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 OR9I1Q8NGQ6 314 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 TLCD1Q96CP7 247 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 TMEM19Q96HH6 336 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 MUS81Q96NY9 551 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 SLCO5A1Q9H2Y9 848 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 SLC7A10Q9NS82 523 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 DCTN4Q9UJW0 460 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 AMDHD2Q9Y303 409 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 USH1CQ9Y6N9 552 aa16.23■□□□□ 0.19
AC004540.1-201ENST00000439120 LIPT2A6NK58 231 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 A8MVM7 634 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 C5orf58C9J3I9 102 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 KLF11O14901 512 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 KRT33AO76009 404 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 TP53P04637 393 aaPredicted RBP16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 ITGA5P08648 1049 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 CD40P25942 277 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 ACVR1BP36896 505 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 NRF1Q16656 503 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 TSPO2Q5TGU0 170 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 TMEM225Q6GV28 225 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 AAED1Q7RTV5 226 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 ABHD12BQ7Z5M8 362 aaPredicted RBP16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 DTX2Q86UW9 622 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 FBXL14Q8N1E6 418 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 C17orf78Q8N4C9 275 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 TMEM99Q8N816 258 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 C1orf162Q8NEQ5 155 aaPredicted RBP16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 OR9K2Q8NGE7 335 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 ADAD1Q96M93 576 aaKnown RBP16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 SF3B5Q9BWJ5 86 aaKnown RBP16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 SPATA9Q9BWV2 254 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 C1QTNF6Q9BXI9 259 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 GRIP2Q9C0E4 1043 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 ADPRHL2Q9NX46 363 aa16.22■□□□□ 0.19
AC004540.1-201ENST00000439120 IFT52Q9Y366 437 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms