RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ADAM28Q9UKQ2 775 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 VSIG4Q9Y279 399 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 PDZD2O15018 2839 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 LCTP09848 1927 aa2.46□□□□□ -2.02
HMGB3P12-201ENST00000438745 BOD1L1Q8NFC6 3051 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 COL4A2P08572 1712 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 NFASCO94856 1347 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 PCDH15Q96QU1 1955 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 IGHV1OR15-9A0A0B4J2B8 117 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 A0A1W2PQ72 361 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ANKRD30BLA7E2S9 258 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 A8MX80 341 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 LCMT2O60294 686 aaKnown RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 IGFBP1P08833 259 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 LAMP1P11279 417 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 COX6B1P14854 86 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 PGAM2P15259 253 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ARF4P18085 180 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 KLK2P20151 261 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 IL2RGP31785 369 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ACVR1BP36896 505 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 CCR2P41597 374 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ASMTP46597 345 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 FNTAP49354 379 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 CSNK1EP49674 416 aaKnown RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 METAP1P53582 386 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ARPP19P56211 112 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 C21orf59P57076 290 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZP4Q12836 540 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 SRSF6Q13247 344 aaKnown RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 IL18R1Q13478 541 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 EXOSC2Q13868 293 aaKnown RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 SERTAD2Q14140 314 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 UBE2V2Q15819 145 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 HACD2Q6Y1H2 254 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 GCNT7Q6ZNI0 430 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ADCK1Q86TW2 530 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 CCDC36Q8IYA8 594 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ZBED8Q8IZ13 594 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 MCOLN2Q8IZK6 566 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 GPD1LQ8N335 351 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ALLCQ8N6M5 410 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 Q8N9G6 341 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 CNNM3Q8NE01 707 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 FAM71CQ8NEG0 241 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ANKRD20A12PQ8NF67 263 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 OR52B4Q8NGK2 314 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 GTSF1Q8WW33 167 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 NCLNQ969V3 563 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 ELMO2Q96JJ3 720 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 C9orf85Q96MD7 179 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 VAT1LQ9HCJ6 419 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 MEPEQ9NQ76 525 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 IMPAD1Q9NX62 359 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 KLRF1Q9NZS2 232 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 NTNG1Q9Y2I2 539 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 DHRS7Q9Y394 339 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 CENPEQ02224 2701 aa2.45□□□□□ -2.02
HMGB3P12-201ENST00000438745 PRRC2AP48634 2157 aaKnown RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 MED13Q9UHV7 2174 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 NBASA2RRP1 2371 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 STAB1Q9NY15 2570 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 EML5Q05BV3 1969 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 FAM230AA0A1W2PPH8 454 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 GSTTP1A0A1W2PQM5 241 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 FRG2CA6NGY1 282 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 SGK1O00141 431 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PDXKO00764 312 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 ALOX15BO15296 676 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PPIHO43447 177 aaKnown RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 DFNA5O60443 496 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TSC22D2O75157 780 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 SCGB2A1O75556 95 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TOM1L1O75674 476 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 NOL4O94818 638 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TOXO94900 526 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TNFSF15O95150 251 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 SDC1P18827 310 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 IL10P22301 178 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 GDF1P27539 372 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 IFNAR2P48551 515 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TDO2P48775 406 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 STK19P49842 368 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 SLC25A1P53007 311 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 BPIFB3P59826 476 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PPIAP62937 165 aaKnown RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 CXCL6P80162 114 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PUDPQ08623 228 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TWF1Q12792 350 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TFDP1Q14186 410 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PDGFRLQ15198 375 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 TGIF1Q15583 401 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 ADPRMQ3LIE5 342 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PRR30Q53SZ7 412 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 BTNL3Q6UXE8 466 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 UNC5DQ6UXZ4 953 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 PAQR9Q6ZVX9 377 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 CATSPER4Q7RTX7 472 aa2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 NET1Q7Z628 596 aaPredicted RBP2.44□□□□□ -2.02
HMGB3P12-201ENST00000438745 BIVMQ86UB2 503 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms