RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 ADAM21Q9UKJ8 722 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 B3GALT5Q9Y2C3 310 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 AMDHD2Q9Y303 409 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 TMED7Q9Y3B3 224 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 RAP2CQ9Y3L5 183 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 FKBP7Q9Y680 259 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 PMF1-BGLAPU3KQ54 211 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 PRR14LQ5THK1 2151 aa6.83□□□□□ -1.32
VPS50-203ENST00000436177 RAI1Q7Z5J4 1906 aaPredicted RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 IGHV4-30-2A0A087WSY4 118 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 A0A1W2PR80 420 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TMEM247A6NEH6 219 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 CFAP73A6NFT4 308 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 ZNF716A6NP11 495 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TM9SF1O15321 606 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 BIRC5O15392 142 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 DNAJA2O60884 412 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 SCN2BO60939 215 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 GPIP06744 558 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 GUSBP08236 651 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 IL7RP16871 459 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 LBPP18428 481 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 CDH2P19022 906 aaPredicted RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 HNF1AP20823 631 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 CXCR1P25024 350 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 EDNRAP25101 427 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TACR3P29371 465 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 PGM1P36871 562 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 RPL14P50914 215 aaKnown RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 MAP2K6P52564 334 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 PRPS1P60891 318 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 ABCE1P61221 599 aaKnown RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 SNRPD2P62316 118 aaKnown RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 KCNJ10P78508 379 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 SPOCK1Q08629 439 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 LRRC74AQ0VAA2 488 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 MAPK14Q16539 360 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 CARTPTQ16568 116 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TMEM249Q2WGJ8 235 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 SPANXN4Q5MJ08 99 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 C1QTNF12Q5T7M4 302 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 SAXO2Q658L1 398 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TYW3Q6IPR3 259 aaKnown RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 FRRS1Q6ZNA5 592 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 RNF130Q86XS8 419 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 HIPK1Q86Z02 1210 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 CCDC103Q8IW40 242 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 PEX5LQ8IYB4 626 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 ZNF781Q8N8C0 355 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 POMGNT2Q8NAT1 580 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 FAM71CQ8NEG0 241 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 WDR60Q8WVS4 1066 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 ZNF75CPQ92670 426 aaPredicted RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 ARL5BQ96KC2 179 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TRNT1Q96Q11 434 aaKnown RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 INPP5KQ9BT40 448 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TAPBPLQ9BX59 468 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 C1QTNF6Q9BXI9 259 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 BEX2Q9BXY8 128 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 NUF2Q9BZD4 464 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 ARMC7Q9H6L4 198 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 LPAR3Q9UBY5 353 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 KCNE5Q9UJ90 142 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 DCTN4Q9UJW0 460 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 TRAPPC4Q9Y296 219 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.82□□□□□ -1.32
VPS50-203ENST00000436177 SLC25A15Q9Y619 301 aa6.82□□□□□ -1.32
VPS50-203ENST00000436177 GOLGA8QA0A0J9YX86 632 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 GOLGA8OA6NCC3 632 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 CCDC154A6NI56 674 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 AGAP5A6NIR3 686 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 CLDN24A6NM45 220 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 E7EQL1 145 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ZNF587BE7ETH6 402 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 GOLGA8NF8WBI6 632 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 H7C417 338 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ZNF208O43345 1280 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 TYROBPO43914 113 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ANP32DO95626 131 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 KRT75O95678 551 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 CD8AP01732 235 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 DBIP07108 87 aaKnown RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 ERCC1P07992 297 aaPredicted RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 ITGA5P08648 1049 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 FAM157CP0CG43 387 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 NCF2P19878 526 aaPredicted RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 USF1P22415 310 aaPredicted RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 GTF2E2P29084 291 aaKnown RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 MPGP29372 298 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 ARRB2P32121 409 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 SLC1A3P43003 542 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 SLC1A6P48664 564 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 EFNA4P52798 201 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 NME5P56597 212 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 UBE2NP61088 152 aaKnown RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 VSNL1P62760 191 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 IRX1P78414 480 aaPredicted RBP6.81□□□□□ -1.32
VPS50-203ENST00000436177 STX3Q13277 289 aa6.81□□□□□ -1.32
VPS50-203ENST00000436177 LARS2Q15031 903 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms