RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 NANOGNBQ7Z5D8 188 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 PHC2Q8IXK0 858 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 SLC15A4Q8N697 577 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 TMEM99Q8N816 258 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 FAM98AQ8NCA5 519 aaKnown RBP15.18■□□□□ 0.02
USHBP1-203ENST00000431146 GALNT6Q8NCL4 622 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 ZNF649Q9BS31 505 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 SLC19A3Q9BZV2 496 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 SLIRPQ9GZT3 109 aaKnown RBP15.18■□□□□ 0.02
USHBP1-203ENST00000431146 ADAM19Q9H013 955 aa15.18■□□□□ 0.02
USHBP1-203ENST00000431146 YARS2Q9Y2Z4 477 aaKnown RBP15.18■□□□□ 0.02
USHBP1-203ENST00000431146 TMEM129A0AVI4 362 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 CCDC182A6NF36 153 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 C4orf47A7E2U8 309 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 ADAM10O14672 748 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 GP1BAP07359 652 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 PAICSP22234 425 aaKnown RBP15.17■□□□□ 0.02
USHBP1-203ENST00000431146 AQP2P41181 271 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 ERVK-25P63136 954 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 C1QL3Q5VWW1 255 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 ARHGAP11AQ6P4F7 1023 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 FAM198BQ6UWH4 519 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 USP43Q70EL4 1123 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 OR51L1Q8NGJ5 315 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 OR5W2Q8NH69 310 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 NUBPLQ8TB37 319 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 RASD2Q96D21 266 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 TEAD3Q99594 435 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 TMEM43Q9BTV4 400 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 MMP25Q9NPA2 562 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 NANSQ9NR45 359 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 NDUFB11Q9NX14 153 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 ERVK13-1Q9NX77 482 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 PPIEQ9UNP9 301 aaKnown RBP15.17■□□□□ 0.02
USHBP1-203ENST00000431146 PTRH2Q9Y3E5 179 aaKnown RBP15.17■□□□□ 0.02
USHBP1-203ENST00000431146 CORINQ9Y5Q5 1042 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 B3GALT1Q9Y5Z6 326 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 B4DXG7 233 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 EIF4E2O60573 245 aaKnown RBP15.17■□□□□ 0.02
USHBP1-203ENST00000431146 CELA2AP08217 269 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 ZNF883P0CG24 379 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 CXCR1P25024 350 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 RPS4XP62701 263 aaKnown RBP15.17■□□□□ 0.02
USHBP1-203ENST00000431146 ZPLD1Q8TCW7 415 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 TAAR8Q969N4 342 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 KATNB1Q9BVA0 655 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 FBXO8Q9NRD0 319 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 TOR4AQ9NXH8 423 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 C19orf25Q9UFG5 118 aaPredicted RBP15.17■□□□□ 0.02
USHBP1-203ENST00000431146 RABL2BQ9UNT1 228 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 BAIAP2Q9UQB8 552 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 CPAMD8Q8IZJ3 1885 aa15.17■□□□□ 0.02
USHBP1-203ENST00000431146 HTR3EA5X5Y0 456 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 C12orf71A8MTZ7 269 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 FLRT2O43155 660 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 OR2J2O76002 312 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 IGHA1P01876 353 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 UMODP07911 640 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 TSPAN19P0C672 248 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 PGCP20142 388 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 SLC2A5P22732 501 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 UGT2B10P36537 528 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 CRYBB2P43320 205 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 P2RX1P51575 399 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 CBFBQ13951 182 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 QPRTQ15274 297 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 COL28A1Q2UY09 1125 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 PLA2G2CQ5R387 149 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 TMEM53Q6P2H8 277 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 NPAS1Q99742 590 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 TBCCD1Q9NVR7 557 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 EML6Q6ZMW3 1958 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 J3QRE1 110 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 KLF7O75840 302 aaPredicted RBP15.16■□□□□ 0.02
USHBP1-203ENST00000431146 IFNGP01579 166 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 F13BP05160 661 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 GP1BBP13224 206 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 CPEP16870 476 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 ARPC4P59998 168 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.16■□□□□ 0.02
USHBP1-203ENST00000431146 BCL2A1Q16548 175 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 BTBD16Q32M84 506 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 TIMM50Q3ZCQ8 353 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 ZNF485Q8NCK3 441 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 PSD4Q8NDX1 1056 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 OR10H4Q8NGA5 316 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 SPRYD4Q8WW59 207 aaPredicted RBP15.16■□□□□ 0.02
USHBP1-203ENST00000431146 NMNAT3Q96T66 252 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 ARHGAP9Q9BRR9 750 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 WDR54Q9H977 334 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 ISG20L2Q9H9L3 353 aaKnown RBP15.16■□□□□ 0.02
USHBP1-203ENST00000431146 PLGRKTQ9HBL7 147 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 MYOTQ9UBF9 498 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 SEC14L4Q9UDX3 406 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 HRH3Q9Y5N1 445 aa15.16■□□□□ 0.02
USHBP1-203ENST00000431146 CDX4O14627 284 aaPredicted RBP15.15■□□□□ 0.02
USHBP1-203ENST00000431146 HNRNPCP07910 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
USHBP1-203ENST00000431146 ENDOUP21128 410 aaKnown RBP15.15■□□□□ 0.02
USHBP1-203ENST00000431146 PSMA1P25786 263 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms