RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 NAA11Q9BSU3 229 aaPredicted RBP15.02■□□□□ -0
TRIM39-209ENST00000428728 C1QTNF6Q9BXI9 259 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 UPB1Q9UBR1 384 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 SLC9A8Q9Y2E8 581 aa15.02■□□□□ -0
TRIM39-209ENST00000428728 FAAHO00519 579 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 EIF1BO60739 113 aaKnown RBP15.01□□□□□ -0.01
TRIM39-209ENST00000428728 IDO1P14902 403 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 PTAFRP25105 342 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 CD40P25942 277 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 CRATP43155 626 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 OR7A5Q15622 319 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 MAPK11Q15759 364 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 GABRA6Q16445 453 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 GTDC1Q4AE62 458 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 SLC9B1Q4ZJI4 515 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 LIN52Q52LA3 116 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 PDCD4Q53EL6 469 aaKnown RBP15.01□□□□□ -0.01
TRIM39-209ENST00000428728 RPS26P11Q5JNZ5 115 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-209ENST00000428728 OTUD3Q5T2D3 398 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-209ENST00000428728 TSPO2Q5TGU0 170 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 AGAP6Q5VW22 663 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 B3GLCTQ6Y288 498 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 ZNF440Q8IYI8 595 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 CADM2Q8N3J6 435 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 OR52P1PQ8NH57 321 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 PMM1Q92871 262 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 AURKBQ96GD4 344 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-209ENST00000428728 CACNG6Q9BXT2 260 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 BARX1Q9HBU1 254 aaPredicted RBP15.01□□□□□ -0.01
TRIM39-209ENST00000428728 SLC7A10Q9NS82 523 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 ADAM21Q9UKJ8 722 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 MGAT4BQ9UQ53 548 aa15.01□□□□□ -0.01
TRIM39-209ENST00000428728 SONP18583 2426 aaKnown RBP15.01□□□□□ -0.01
TRIM39-209ENST00000428728 E7EQL1 145 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 SSX4O60224 188 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 SLC22A3O75751 556 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 AKR7A3O95154 331 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 TP53P04637 393 aaPredicted RBP15□□□□□ -0.01
TRIM39-209ENST00000428728 IL6P05231 212 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 THBS1P07996 1170 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 CXCR1P25024 350 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 MVDP53602 400 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 DSTNP60981 165 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 SLC25A3Q00325 362 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 BNIP2Q12982 314 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 CEACAM7Q14002 265 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 SLC17A1Q14916 467 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 ATG16L1Q676U5 607 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 OR7E24Q6IFN5 339 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 PAQR6Q6TCH4 344 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 TMEM99Q8N816 258 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 OR9I1Q8NGQ6 314 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 RADILQ96JH8 1075 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 CALML5Q9NZT1 146 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 ZNF443Q9Y2A4 671 aaPredicted RBP15□□□□□ -0.01
TRIM39-209ENST00000428728 B3GALT5Q9Y2C3 310 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 RTTNQ86VV8 2226 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 ARFGEF3Q5TH69 2177 aa15□□□□□ -0.01
TRIM39-209ENST00000428728 DSPPQ9NZW4 1301 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 CDHR4A6H8M9 788 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 LIPT2A6NK58 231 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 SLCO1B7G3V0H7 640 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 PDLIM1O00151 329 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 ZNF500O60304 480 aaPredicted RBP14.99□□□□□ -0.01
TRIM39-209ENST00000428728 GPIP06744 558 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 TTKP33981 857 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 NUDT6P53370 316 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 CRISP3P54108 245 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 IRX1P78414 480 aaPredicted RBP14.99□□□□□ -0.01
TRIM39-209ENST00000428728 NRF1Q16656 503 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 C6orf10Q5SRN2 563 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 C11orf71Q6IPW1 123 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 MAVSQ7Z434 540 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 GPAT4Q86UL3 456 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 FBXL14Q8N1E6 418 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 OR9K2Q8NGE7 335 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 HTRA1Q92743 480 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 MAELQ96JY0 434 aaKnown RBP14.99□□□□□ -0.01
TRIM39-209ENST00000428728 ADAD1Q96M93 576 aaKnown RBP14.99□□□□□ -0.01
TRIM39-209ENST00000428728 MUS81Q96NY9 551 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 OR52B2Q96RD2 323 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 MDFIQ99750 246 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 DHRS9Q9BPW9 319 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 GRIP2Q9C0E4 1043 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 ADAM19Q9H013 955 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 MANSC1Q9H8J5 431 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 TPT1P8Q9HAU6 139 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 CBLN4Q9NTU7 201 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 PARPBPQ9NWS1 579 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 ADPRHL2Q9NX46 363 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 NKIRAS1Q9NYS0 192 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 DCTN4Q9UJW0 460 aa14.99□□□□□ -0.01
TRIM39-209ENST00000428728 PRG2P13727 222 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 CDH2P19022 906 aaPredicted RBP14.98□□□□□ -0.01
TRIM39-209ENST00000428728 NCF2P19878 526 aaPredicted RBP14.98□□□□□ -0.01
TRIM39-209ENST00000428728 ACAA2P42765 397 aaKnown RBP14.98□□□□□ -0.01
TRIM39-209ENST00000428728 MAP2K6P52564 334 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 MAGOHP61326 146 aaKnown RBP14.98□□□□□ -0.01
TRIM39-209ENST00000428728 GSTA3Q16772 222 aa14.98□□□□□ -0.01
TRIM39-209ENST00000428728 RNF220Q5VTB9 566 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms