RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 NXF2Q9GZY0 626 aaKnown RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 BABAM2Q9NXR7 383 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 EXTL2Q9UBQ6 330 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 TAF4O00268 1085 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF749O43361 778 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 AKAP8O43823 692 aaKnown RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 SBK2P0C263 348 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 CSF2RBP32927 897 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 DHPSP49366 369 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 INPP1P49441 399 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 FOXK1P85037 733 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 PRTGQ2VWP7 1150 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 HES5Q5TA89 166 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 ADGRL4Q9HBW9 690 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 GALNT9Q9HCQ5 603 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 FGF20Q9NP95 211 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 VDAC3Q9Y277 283 aa10.92□□□□□ -0.66
PTPRN-204ENST00000423636 EXOSC1Q9Y3B2 195 aaKnown RBP10.92□□□□□ -0.66
PTPRN-204ENST00000423636 TRAV6A0A075B6T7 132 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 SERINC4A6NH21 518 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 CPNE3O75131 537 aaKnown RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 HLA-DQA2P01906 255 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 HMGN1P05114 100 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ADRB1P08588 477 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 CD3GP09693 182 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 OR8G3PP0DMU2 310 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 SRFP11831 508 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF3P17036 446 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 GABRA5P31644 462 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 CASP3P42574 277 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 CDKN2AP42771 156 aaKnown RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 DEFA1P59665 94 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 DEFA3P59666 94 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ETFDHQ16134 617 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ARHGAP40Q5TG30 622 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 PTCRAQ6ISU1 281 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 SAMD14Q8IZD0 417 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ZBTB8BQ8NAP8 495 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 DERL3Q96Q80 235 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ATF6BQ99941 703 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 NUDT9Q9BW91 350 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 PHF7Q9BWX1 381 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 FBRSQ9HAH7 460 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 MRPS33Q9Y291 106 aaKnown RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 RP1L1Q8IWN7 2480 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 TMEM72A0PK05 275 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 METTL12A8MUP2 240 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ALOX12BO75342 701 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 RCBTB2O95199 551 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 AGR2O95994 175 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 EIF4EP06730 217 aaKnown RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 HOXC4P09017 264 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 IL11P20809 199 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 DRD5P21918 477 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 MST1P26927 711 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 KIR2DL3P43628 341 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 TPBGQ13641 420 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 FHL1Q13642 323 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 MEP1BQ16820 701 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF485Q8NCK3 441 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 IL17RDQ8NFM7 739 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 KCNK15Q9H427 330 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 RANGRFQ9HD47 186 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 NKIRAS2Q9NYR9 191 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 TEX51A0A1B0GUA7 166 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 TMEM129A0AVI4 362 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 PLA2G10O15496 165 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 EEF1E1O43324 174 aaKnown RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF354AO60765 605 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 THBS1P07996 1170 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 TACR3P29371 465 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 CTXN1P60606 82 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 LTBQ06643 244 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ACSM3Q53FZ2 586 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 FAM199XQ6PEV8 388 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF517Q6ZMY9 492 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-204ENST00000423636 GKN2Q86XP6 184 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 LNX2Q8N448 690 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 BEST4Q8NFU0 473 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 APMAPQ9HDC9 416 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
PTPRN-204ENST00000423636 CCDC182A6NF36 153 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 OR5K4A6NMS3 321 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 CHP2O43745 196 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 NME1P15531 152 aaKnown RBP10.9□□□□□ -0.66
PTPRN-204ENST00000423636 EDNRAP25101 427 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 ATP12AP54707 1039 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 CLDN6P56747 220 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 MELKQ14680 651 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 GRM7Q14831 915 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.9□□□□□ -0.66
PTPRN-204ENST00000423636 STPG1Q5TH74 334 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 GARNL3Q5VVW2 1013 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 MDGA2Q7Z553 956 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 C3orf49Q96BT1 292 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 SGTBQ96EQ0 304 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 WDR76Q9H967 626 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 CMC2Q9NRP2 79 aa10.9□□□□□ -0.66
PTPRN-204ENST00000423636 KLHDC2Q9Y2U9 406 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms