RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 BCAS1O75363 584 aaPredicted RBP14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 IGLV1-44P01699 117 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 PROCP04070 461 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 ABHD2P08910 425 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 CECR9P0C854 216 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 CDH2P19022 906 aaPredicted RBP14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 MATN1P21941 496 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 CALCRP30988 508 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 HTR3AP46098 478 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 ARFIP2P53365 341 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 HGFACQ04756 655 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 EMBQ6PCB8 327 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 PAQR6Q6TCH4 344 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 PEG10Q86TG7 708 aaKnown RBP14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 OR1K1Q8NGR3 316 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 MAGEE2Q8TD90 523 aaPredicted RBP14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 MZB1Q8WU39 189 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF317Q96PQ6 595 aaPredicted RBP14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 SF3B5Q9BWJ5 86 aaKnown RBP14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 SERHL2Q9H4I8 314 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 MOV10Q9HCE1 1003 aaKnown RBP14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 ATAD3AQ9NVI7 634 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 PYCARDQ9ULZ3 195 aa14.49□□□□□ -0.09
CHCHD3-202ENST00000423635 HOXB1P14653 301 aaPredicted RBP14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 NPR2P20594 1047 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 RYKP34925 604 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 THBS4P35443 961 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 MAP2K6P52564 334 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 POU3F1Q03052 451 aaPredicted RBP14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 GALNTL6Q49A17 601 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 PDLIM3Q53GG5 364 aaPredicted RBP14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 AAED1Q7RTV5 226 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 CNPY4Q8N129 248 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 OR5AK3PQ8NH89 298 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 BCL2L2Q92843 193 aaPredicted RBP14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 TMEM186Q96B77 213 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 DDIT4LQ96D03 193 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 AURKBQ96GD4 344 aaPredicted RBP14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 RBM4Q9BWF3 364 aaKnown RBP14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 EXOSC3Q9NQT5 275 aaKnown RBP14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 HIF1ANQ9NWT6 349 aa14.48□□□□□ -0.09
CHCHD3-202ENST00000423635 GLRA3O75311 464 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 LYPLA1O75608 230 aaPredicted RBP14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 IGKV3-15P01624 115 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 FGF4P08620 206 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 LIMS1P48059 325 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 UBE2NP61088 152 aaKnown RBP14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 ETF1P62495 437 aaKnown RBP14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 RPS26P62854 115 aaKnown RBP14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 HBA1P69905 142 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 CCNIQ14094 377 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 ADRM1Q16186 407 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 CCDC153Q494R4 210 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 KANK2Q63ZY3 851 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 OLIG3Q7RTU3 272 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 C6orf120Q7Z4R8 191 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 OR9K2Q8NGE7 335 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 IFT81Q8WYA0 676 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 ANKRD27Q96NW4 1050 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF385AQ96PM9 386 aaKnown RBP14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 ZNF696Q9H7X3 374 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 OSGIN1Q9UJX0 560 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 GRIP1Q9Y3R0 1128 aa14.47□□□□□ -0.09
CHCHD3-202ENST00000423635 TMED7-TICAM2A0A0A6YYA0 188 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 TMEM72A0PK05 275 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 PLIN3O60664 434 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 LGI1O95970 557 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 CHEK2O96017 543 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 CCNA2P20248 432 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 MAPK1P28482 360 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 IDH2P48735 452 aaKnown RBP14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 KCNJ10P78508 379 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 PLAURQ03405 335 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 PTGR1Q14914 329 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 UGT3A2Q3SY77 523 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 OTUD3Q5T2D3 398 aaPredicted RBP14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 TYW3Q6IPR3 259 aaKnown RBP14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 SPATA21Q7Z572 469 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 SVOPLQ8N434 492 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 ZG16BQ96DA0 208 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 JMJD8Q96S16 334 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 PRPF18Q99633 342 aaKnown RBP14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 RACGAP1Q9H0H5 632 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 POLE3Q9NRF9 147 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 EXD2Q9NVH0 621 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 TMED7Q9Y3B3 224 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 FIS1Q9Y3D6 152 aa14.46□□□□□ -0.09
CHCHD3-202ENST00000423635 A0A1W2PPM1 405 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 LYNX1G3V0Z9 82 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 NR5A2O00482 541 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 CFLARO15519 480 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 MSMBP08118 114 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 LYNX1P0DP58 116 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 CPA3P15088 417 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 POLR2HP52434 150 aaKnown RBP14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 CKAP4Q07065 602 aaKnown RBP14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 RIMKLAQ8IXN7 391 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 ARFGAP2Q8N6H7 521 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 TMEM99Q8N816 258 aa14.45□□□□□ -0.1
CHCHD3-202ENST00000423635 CLDND2Q8NHS1 167 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms