RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SYT10Q6XYQ8 523 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 LSRQ86X29 649 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 ZNF786Q8N393 782 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 NATD1Q8N6N6 113 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 ZIC4Q8N9L1 334 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 POMGNT2Q8NAT1 580 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 NEU4Q8WWR8 484 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 IFT81Q8WYA0 676 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 COQ8BQ96D53 544 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 KCNS3Q9BQ31 491 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 SAP130Q9H0E3 1048 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 METTL17Q9H7H0 456 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 ZNF442Q9H7R0 627 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 EXOSC3Q9NQT5 275 aaKnown RBP8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 ATAD3AQ9NVI7 634 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 PSMC3IPQ9P2W1 217 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 GIMAP2Q9UG22 337 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 FBXO9Q9UK97 447 aaPredicted RBP8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 MKLN1Q9UL63 735 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 SLC35A3Q9Y2D2 325 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 PCDHB14Q9Y5E9 798 aa8.85□□□□□ -0.99
TNFAIP3-202ENST00000420009 ARPC4-TTLL3A0A0A6YYG9 625 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 A0A1W2PPM1 405 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 DUXAA6NLW8 204 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 FAM157AC9JC47 383 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 RIPK2O43353 540 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 LYPLA1O75608 230 aaPredicted RBP8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 CHEK2O96017 543 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 GUSBP08236 651 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 CECR9P0C854 216 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 CDH2P19022 906 aaPredicted RBP8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 PAX7P23759 505 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 CALCRP30988 508 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 SLC1A3P43003 542 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 SLC35A1P78382 337 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 HGFACQ04756 655 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 TBRG1Q3YBR2 411 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 CCDC153Q494R4 210 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 XKR7Q5GH72 579 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 VHLLQ6RSH7 139 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 PAQR6Q6TCH4 344 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 RIMKLAQ8IXN7 391 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 CNPY4Q8N129 248 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 C3orf56Q8N813 242 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 NOA1Q8NC60 698 aaKnown RBP8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 NUP37Q8NFH4 326 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 OR9K2Q8NGE7 335 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 OR1K1Q8NGR3 316 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 ZNF563Q8TA94 476 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 TWIST2Q8WVJ9 160 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 ZNF385AQ96PM9 386 aaKnown RBP8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 ZNF317Q96PQ6 595 aaPredicted RBP8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 DOK1Q99704 481 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 SEC61A2Q9H9S3 476 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 GRPEL1Q9HAV7 217 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 PCDHGB4Q9UN71 923 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 FIS1Q9Y3D6 152 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 SPEF1Q9Y4P9 236 aa8.84□□□□□ -0.99
TNFAIP3-202ENST00000420009 TMED7-TICAM2A0A0A6YYA0 188 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 RNF103-CHMP3A0A140T963 221 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 TMEM129A0AVI4 362 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 ZC3H12DA2A288 527 aaKnown RBP8.83□□□□□ -1
TNFAIP3-202ENST00000420009 TMEM233B4DJY2 109 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 B4DSR2 109 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 hCG_2039718K7EN88 272 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 PIP5K1BO14986 540 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 ZNF208O43345 1280 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 LGI1O95970 557 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 IGKV3-15P01624 115 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 ERCC1P07992 297 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-202ENST00000420009 CPA3P15088 417 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 IFNGR1P15260 489 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 CCNA2P20248 432 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 MATN1P21941 496 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 MAPK1P28482 360 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 RYKP34925 604 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 SOAT1P35610 550 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 HTR3AP46098 478 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 ARFIP2P53365 341 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 LGALS3BPQ08380 585 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 FUT5Q11128 374 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 CCNIQ14094 377 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 UGT3A2Q3SY77 523 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 FAM153CQ494X1 144 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 TYW3Q6IPR3 259 aaKnown RBP8.83□□□□□ -1
TNFAIP3-202ENST00000420009 ANKRD16Q6P6B7 361 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 FRRS1Q6ZNA5 592 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 TRMT10CQ7L0Y3 403 aaKnown RBP8.83□□□□□ -1
TNFAIP3-202ENST00000420009 AAED1Q7RTV5 226 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 C16orf62Q7Z3J2 963 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 C6orf120Q7Z4R8 191 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 ABHD12BQ7Z5M8 362 aaPredicted RBP8.83□□□□□ -1
TNFAIP3-202ENST00000420009 GLCCI1Q86VQ1 547 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 DDIASQ8IXT1 998 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 ZCCHC24Q8N2G6 241 aaKnown RBP8.83□□□□□ -1
TNFAIP3-202ENST00000420009 SVOPLQ8N434 492 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 KRTCAP2Q8N6L1 136 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
TNFAIP3-202ENST00000420009 OR4F15Q8NGB8 312 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms