RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 IL1BP01584 269 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 PCCAP05165 728 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 ASGR1P07306 291 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 PGCP20142 388 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 CALB2P22676 271 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 COX7A1P24310 79 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 KLK7P49862 253 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 CCR6P51684 374 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 IFT88Q13099 833 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 MXD4Q14582 209 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 KLF17Q5JT82 389 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 C1orf146Q5VVC0 180 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 LRRC8BQ6P9F7 803 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 CTAGE6Q86UF2 777 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF429Q86V71 674 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 RALGPS2Q86X27 583 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 SLC22A9Q8IVM8 553 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 C6orf223Q8N319 242 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 MDS2Q8NDY4 140 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 OR6C4Q8NGE1 309 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 DNAJA4Q8WW22 397 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 RPL3LQ92901 407 aaKnown RBP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF607Q96SK3 696 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 TSG101Q99816 390 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 GCOM2Q9BZD3 368 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 GPR61Q9BZJ8 451 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 CLEC4AQ9UMR7 237 aa2.62□□□□□ -1.99
HMGB1P49-201ENST00000418882 CLDN5O00501 218 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 MSH4O15457 936 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 TBX19O60806 448 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 TNFSF13O75888 250 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 KLF8O95600 359 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 ALOX5P09917 674 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 RPA2P15927 270 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 ATP6V1C1P21283 382 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 PCMT1P22061 227 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 HTR1FP30939 366 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 OTX2P32243 289 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 HPCAL1P37235 193 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 ACADVLP49748 655 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 MAP2K1Q02750 393 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 TGFBR3Q03167 851 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 CHRNB3Q05901 458 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 PDK4Q16654 411 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 IMMTQ16891 758 aaKnown RBP2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 NSUN5P1Q3KNT7 163 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 CAVIN4Q5BKX8 364 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 C1orf185Q5T7R7 199 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 CENPLQ8N0S6 344 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 PNKDQ8N490 385 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 AGR3Q8TD06 166 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 TMEM158Q8WZ71 300 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 NT5C3BQ969T7 300 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZBTB18Q99592 522 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 RASL11BQ9BPW5 248 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 SPATA16Q9BXB7 569 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 NAT10Q9H0A0 1025 aaKnown RBP2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 VCX2Q9H322 139 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 NCOR1P1Q9H4R4 102 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 TREM2Q9NZC2 230 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 C6orf203Q9P0P8 240 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 ALG6Q9Y672 507 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 TTC41PQ6P2S7 1318 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 WDR19Q8NEZ3 1342 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 PLEKHH1Q9ULM0 1364 aa2.61□□□□□ -1.99
HMGB1P49-201ENST00000418882 IGHV3OR16-13A0A075B7E8 117 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 GSAPA4D1B5 854 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF716A6NP11 495 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 DNALI1O14645 258 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 CASQ2O14958 399 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 SNNO75324 88 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 IDH1O75874 414 aaKnown RBP2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 TM7SF2O76062 418 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 SERPINA3P01011 423 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 UGT2B4P06133 528 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 UQCRFS1P1P0C7P4 283 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZNF735P0CB33 412 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 NT5EP21589 574 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 PLA2G16P53816 162 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 PAX5Q02548 391 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZMYND11Q15326 602 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 RABGAP1LQ5R372 815 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 ATL3Q6DD88 541 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 CCDC137Q6PK04 289 aaKnown RBP2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 ZFP2Q6ZN57 461 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 COX15Q7KZN9 410 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 PRSS41Q7RTY9 318 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 TPRA1Q86W33 373 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 LRRC43Q8N309 656 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 TPRX1Q8N7U7 411 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 AKR7LQ8NHP1 331 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 GIMAP1Q8WWP7 306 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 UCN3Q969E3 161 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 FBXO32Q969P5 355 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 MYLPFQ96A32 169 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 STARD4Q96DR4 205 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 CFAP53Q96M91 514 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 OR2M2Q96R28 347 aa2.6□□□□□ -1.99
HMGB1P49-201ENST00000418882 GPA33Q99795 319 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms