RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 RNF217Q8TC41 542 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 ADAMTS16Q8TE57 1224 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 ABHD3Q8WU67 409 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 TPD52L3Q96J77 140 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 TMEM43Q9BTV4 400 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 SLC19A3Q9BZV2 496 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 MUC13Q9H3R2 512 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 BCO1Q9HAY6 547 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 JKAMPQ9P055 326 aa13.08□□□□□ -0.32
LIMS1-206ENST00000414829 PRPF19Q9UMS4 504 aaKnown RBP13.08□□□□□ -0.32
LIMS1-206ENST00000414829 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-206ENST00000414829 PHF3Q92576 2039 aaKnown RBP13.07□□□□□ -0.32
LIMS1-206ENST00000414829 TRAV36DV7A0A075B6V5 113 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 NKX2-6A6NCS4 301 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 LIPT2A6NK58 231 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 B2RBV5 119 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 SMAD9O15198 467 aaKnown RBP13.07□□□□□ -0.32
LIMS1-206ENST00000414829 NPIPB7O75200 414 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 OR5F1O95221 314 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 STAMBPO95630 424 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 ZNF682O95780 498 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 IFNW1P05000 195 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 YES1P07947 543 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 AGTR1P30556 359 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 KIR2DL2P43627 348 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-206ENST00000414829 CRYBA2P53672 197 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 TAS2R41P59536 307 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 SIRPAP78324 504 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 SLC25A3Q00325 362 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 RASGEF1BQ0VAM2 473 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 FOXF2Q12947 444 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 IFI44LQ53G44 452 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 FKBP9P1Q75LS8 142 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 COMTD1Q86VU5 262 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 CYP4Z1Q86W10 505 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 LIX1LQ8IVB5 337 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 ROBO4Q8WZ75 1007 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 SF3B5Q9BWJ5 86 aaKnown RBP13.07□□□□□ -0.32
LIMS1-206ENST00000414829 RBM24Q9BX46 236 aaKnown RBP13.07□□□□□ -0.32
LIMS1-206ENST00000414829 GORASP2Q9H8Y8 452 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 ELOVL5Q9NYP7 299 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 C6orf203Q9P0P8 240 aaPredicted RBP13.07□□□□□ -0.32
LIMS1-206ENST00000414829 CORINQ9Y5Q5 1042 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 SNX13Q9Y5W8 968 aa13.07□□□□□ -0.32
LIMS1-206ENST00000414829 DOPEY2Q9Y3R5 2298 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 IGKV3D-15A0A087WSY6 115 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 HTR3EA5X5Y0 456 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
LIMS1-206ENST00000414829 A8MXE2 369 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 CNOT4O95628 575 aaKnown RBP13.06□□□□□ -0.32
LIMS1-206ENST00000414829 MT-ATP6P00846 226 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 SERPINA1P01009 418 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 FPR1P21462 350 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 UQCRC1P31930 480 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 RBM34P42696 430 aaKnown RBP13.06□□□□□ -0.32
LIMS1-206ENST00000414829 SLC16A1P53985 500 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 CDH12P55289 794 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 H3F3AP84243 136 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 CDSNQ15517 529 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 OR7A5Q15622 319 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 FXNQ16595 210 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 DNAL1Q4LDG9 190 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 DEF8Q6ZN54 512 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 BEND4Q6ZU67 534 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 CBLL1Q75N03 491 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 LUZP2Q86TE4 346 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 RBM15BQ8NDT2 890 aaKnown RBP13.06□□□□□ -0.32
LIMS1-206ENST00000414829 STARD4Q96DR4 205 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 PRRC1Q96M27 445 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 CDRT15Q96T59 188 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 PSD2Q9BQI7 771 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 KLHL4Q9C0H6 718 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 ENKD1Q9H0I2 346 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 USP22Q9UPT9 525 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 PTPN13Q12923 2485 aa13.06□□□□□ -0.32
LIMS1-206ENST00000414829 ZC3H12DA2A288 527 aaKnown RBP13.05□□□□□ -0.32
LIMS1-206ENST00000414829 AQP7P3A6NL99 342 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 FZD7O75084 574 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 GOSR1O95249 250 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 IGFBP2P18065 325 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 CPOXP36551 454 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 RASSF2P50749 326 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 CEACAM7Q14002 265 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 NPTX1Q15818 432 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 OTUD3Q5T2D3 398 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-206ENST00000414829 SP5Q6BEB4 398 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-206ENST00000414829 GLYATQ6IB77 296 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 VWA1Q6PCB0 445 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 TTC33Q6PID6 262 aaPredicted RBP13.05□□□□□ -0.32
LIMS1-206ENST00000414829 PLXDC2Q6UX71 529 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 MEX3BQ6ZN04 569 aaKnown RBP13.05□□□□□ -0.32
LIMS1-206ENST00000414829 BTLAQ7Z6A9 289 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 GALNT5Q7Z7M9 940 aa13.05□□□□□ -0.32
LIMS1-206ENST00000414829 ACBD4Q8NC06 268 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms