RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 IDUAP35475 653 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 NUP107P57740 925 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 OR2B6P58173 313 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 CHRNB3Q05901 458 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 SF3B4Q15427 424 aaKnown RBP eCLIP27.39■■□□□ 1.981e-6■□□□□ 9.8
CSNK1E-206ENST00000413574 FAM98BQ52LJ0 330 aaKnown RBP27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 C9orf106Q8NAJ2 232 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 TAAR8Q969N4 342 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 MPP4Q96JB8 637 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 MAGIXQ9H6Y5 334 aa27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 NMNAT1Q9HAN9 279 aaPredicted RBP27.39■■□□□ 1.98
CSNK1E-206ENST00000413574 DIDO1Q9BTC0 2240 aaKnown RBP27.39■■□□□ 1.97
CSNK1E-206ENST00000413574 CD8B2A6NJW9 211 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 AQP8O94778 261 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 THRBP10828 461 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 ITGA2P17301 1181 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 RAC3P60763 192 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 ZNF239Q16600 458 aaKnown RBP27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 TTC33Q6PID6 262 aaPredicted RBP27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 UCN2Q96RP3 112 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 TMEM43Q9BTV4 400 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 ZNF426Q9BUY5 554 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 TIGARQ9NQ88 270 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 PAQR5Q9NXK6 330 aaPredicted RBP27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 ERRFI1Q9UJM3 462 aaPredicted RBP27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 TESMINQ9Y4I5 508 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 PMS2P2O95744 297 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 FPR1P21462 350 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 ENPP1P22413 925 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 IFNA8P32881 189 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 LSM11P83369 360 aaKnown RBP eCLIP27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 CCNIQ14094 377 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 OR7A5Q15622 319 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 PIK3C3Q8NEB9 887 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 PIP5K1AQ99755 562 aa27.38■■□□□ 1.97
CSNK1E-206ENST00000413574 ERICH4A6NGS2 130 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 AHSA1O95433 338 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 SYNGR4O95473 234 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 MAGEA2P43356 314 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 UGT2B15P54855 530 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 CSNK2A1P68400 391 aaPredicted RBP27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 PIWIL3Q7Z3Z3 882 aaKnown RBP27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 P4HA3Q7Z4N8 544 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 CPNE4Q96A23 557 aaPredicted RBP27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 SLC25A36Q96CQ1 311 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 CCDC120Q96HB5 630 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 PRRG4Q9BZD6 226 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 MCTS1Q9ULC4 181 aaKnown RBP27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 TRAPPC4Q9Y296 219 aa27.37■■□□□ 1.97
CSNK1E-206ENST00000413574 LIPT2A6NK58 231 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 LRRN3E7EW58 273 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 CBLP22681 906 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 TRAM2Q15035 370 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 OR52J3Q8NH60 311 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 PFN4Q8NHR9 129 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 TMEM239Q8WW34 195 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 WNT2BQ93097 391 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 MEPEQ9NQ76 525 aaPredicted RBP27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 SLC5A6Q9Y289 635 aa27.36■■□□□ 1.97
CSNK1E-206ENST00000413574 TRAV36DV7A0A075B6V5 113 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 MBD3L4A6NDZ8 208 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 MBD3L3A6NE82 208 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 MBD3L5A6NJ08 208 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 GPIP06744 558 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 H1F0P07305 194 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 RAP2AP10114 183 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 UMPSP11172 480 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 NQO1P15559 274 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 LTBQ06643 244 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 MBD3L2Q8NHZ7 208 aaPredicted RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 POP5Q969H6 163 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 SLCO4A1Q96BD0 722 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 RSRC1Q96IZ7 334 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 CHID1Q9BWS9 393 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 ZNF175Q9Y473 711 aa27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 HELZ2Q9BYK8 2649 aaKnown RBP27.35■■□□□ 1.97
CSNK1E-206ENST00000413574 ZNF814B7Z6K7 855 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 ANKRD65E5RJM6 399 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 FTCDNL1E5RQL4 147 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 SMAD9O15198 467 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 ADORA2A-AS1P86434 159 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 SPIBQ01892 262 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 NAXEQ8NCW5 288 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 GCN1Q92616 2671 aaKnown RBP27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 PIP5K1CO60331 668 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 SLC35A1P78382 337 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 SRSF1Q07955 248 aaKnown RBP eCLIP27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 TMEM211Q6ICI0 200 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 TBPL2Q6SJ96 375 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 GCNT2Q8N0V5 402 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 MOGAT1Q96PD6 335 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 TAPBPLQ9BX59 468 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 C20orf141Q9NUB4 165 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 SEC14L4Q9UDX3 406 aa27.34■■□□□ 1.97
CSNK1E-206ENST00000413574 NCOA6Q14686 2063 aaPredicted RBP27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 TRBV4-1A0A0J9YWV2 114 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 RAMP1O60894 148 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 AKR7A3O95154 331 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 RRM2P31350 389 aa27.33■■□□□ 1.97
CSNK1E-206ENST00000413574 TIMP3P35625 211 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms