RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 TRAPPC4Q9Y296 219 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 MPDZO75970 2070 aa9□□□□□ -0.97
NCKIPSD-202ENST00000413374 IGKV3D-15A0A087WSY6 115 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 TRBV5-3A0A0A0MS03 114 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 LIPT2A6NK58 231 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 A8MVM7 634 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 GPR171O14626 319 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 EIF1BO60739 113 aaKnown RBP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 RAD51DO75771 328 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 OPN1SWP03999 348 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 GPIP06744 558 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 GPX2P18283 190 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 CDH2P19022 906 aaPredicted RBP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 PPIBP23284 216 aaKnown RBP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 RPS5P46782 204 aaKnown RBP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 ARFIP2P53365 341 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 NKX6-1P78426 367 aaPredicted RBP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 H3F3AP84243 136 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 GUCY1A3Q02108 690 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 PDK3Q15120 406 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 ADRM1Q16186 407 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 C1orf140Q5VVS0 124 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 PRAMEF8Q5VWM4 474 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 PRAMEF7Q5VXH5 474 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 FBXW9Q5XUX1 488 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 TMEM225Q6GV28 225 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 CASP12Q6UXS9 341 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 GPAT4Q86UL3 456 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 KDM8Q8N371 416 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 SMYD1Q8NB12 490 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 OR52N5Q8NH56 324 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 HSD17B8Q92506 261 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 AKAP1Q92667 903 aaKnown RBP eCLIP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 NEUROG1Q92886 237 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 KTI12Q96EK9 354 aaPredicted RBP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 PERPQ96FX8 193 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 CGREF1Q99674 301 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 CCL19Q99731 98 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 CPPED1Q9BRF8 314 aaPredicted RBP8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 POTEKPQ9BYX7 375 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 OR10A4Q9H209 315 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 UPB1Q9UBR1 384 aa8.99□□□□□ -0.97
NCKIPSD-202ENST00000413374 PRRC2AP48634 2157 aaKnown RBP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 LOC100653049A0A140TA62 436 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 A0A1B0GWA3 101 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 DPRXA6NFQ7 191 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ELOA3DA6NLF2 546 aaPredicted RBP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 M0QX08 132 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 SMPD2O60906 423 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 KRT34O76011 436 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 TROVE2P10155 538 aaKnown RBP eCLIP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ETS2P15036 469 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 GGT1P19440 569 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 HTR2AP28223 471 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 PRKAR1BP31321 381 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 NR1H2P55055 460 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 SLC17A1Q14916 467 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 PPA1Q15181 289 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 CYP51A1Q16850 503 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZSWIM7Q19AV6 140 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ELOA3BQ3SY89 546 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 TSPO2Q5TGU0 170 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 CGB2Q6NT52 195 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 AAED1Q7RTV5 226 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 KRT73Q86Y46 540 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 PTOV1Q86YD1 416 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF433Q8N7K0 673 aaPredicted RBP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZIC4Q8N9L1 334 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 HIPK4Q8NE63 616 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ELOA3Q8NG57 546 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 LILRB1Q8NHL6 650 aaPredicted RBP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 MUCL1Q96DR8 90 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ANKRD27Q96NW4 1050 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF385AQ96PM9 386 aaKnown RBP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF607Q96SK3 696 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 SPATA5L1Q9BVQ7 753 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 GSX1Q9H4S2 264 aaPredicted RBP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 TMEM38AQ9H6F2 299 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 SLC7A10Q9NS82 523 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 TMEM45AQ9NWC5 275 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 BEX4Q9NWD9 120 aaPredicted RBP8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 ASB6Q9NWX5 421 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 SEC14L4Q9UDX3 406 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 SLC13A4Q9UKG4 626 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 FLVCR1Q9Y5Y0 555 aa8.98□□□□□ -0.97
NCKIPSD-202ENST00000413374 SPG11Q96JI7 2443 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 FBP2O00757 339 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 DNPH1O43598 174 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 SERPINB7O75635 380 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 MFN2O95140 757 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 AHSA1O95433 338 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 CD3EP07766 207 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 HOXC12P31275 282 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 ZNF83P51522 516 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 MAP2K6P52564 334 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 SLC16A1P53985 500 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 IRX1P78414 480 aaPredicted RBP8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 IL1RL1Q01638 556 aa8.97□□□□□ -0.97
NCKIPSD-202ENST00000413374 EGR4Q05215 589 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms