RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NACC2Q96BF6 587 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 BARHL1Q9BZE3 327 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 OR8D2Q9GZM6 311 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 NXF5Q9H1B4 397 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ADGRL4Q9HBW9 690 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 NRIP3Q9NQ35 241 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ABCB10Q9NRK6 738 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 IL20RAQ9UHF4 553 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 HIF3AQ9Y2N7 669 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 TNRC6BQ9UPQ9 1833 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ARPC4-TTLL3A0A0A6YYG9 625 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 FAM183AA6NL82 134 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ALG1L2C9J202 215 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 WWP2O00308 870 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 RGS5O15539 181 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 TBX1O43435 398 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 RNF13O43567 381 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 GDF9O60383 454 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 FOLR1P15328 257 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 CSF2RBP32927 897 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 SLC25A1P53007 311 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 MRPL28Q13084 256 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 CRMP1Q14194 572 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 PON3Q15166 354 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 STEAP3Q658P3 488 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 TEX19Q8NA77 164 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 OR10H4Q8NGA5 316 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 OR4D9Q8NGE8 314 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 OR5M3Q8NGP4 307 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 PHYHIPQ92561 330 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 EFHD2Q96C19 240 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 TRMT61AQ96FX7 289 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 CNN2Q99439 309 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 KCNS3Q9BQ31 491 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 KATNB1Q9BVA0 655 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ADAM19Q9H013 955 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ENKD1Q9H0I2 346 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 SMOC1Q9H4F8 434 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 RYDENQ9NUL5 291 aaKnown RBP12.42□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF229Q9UJW7 825 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 MOKQ9UQ07 419 aa12.42□□□□□ -0.42
LIMS1-205ENST00000410093 SPTBP11277 2137 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 A0A1B0GTQ1 180 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 GABRPO00591 440 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 CTDSP2O14595 271 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 CASKO14936 926 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 HYAL3O43820 417 aaPredicted RBP12.41□□□□□ -0.42
LIMS1-205ENST00000410093 TSPAN2O60636 221 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 APOL3O95236 402 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 TXNDC12O95881 172 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 PGCP20142 388 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 HOXD12P35452 270 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 RPL4P36578 427 aaKnown RBP12.41□□□□□ -0.42
LIMS1-205ENST00000410093 HNRNPA0Q13151 305 aaKnown RBP12.41□□□□□ -0.42
LIMS1-205ENST00000410093 EFR3AQ14156 821 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF791Q3KP31 576 aaPredicted RBP12.41□□□□□ -0.42
LIMS1-205ENST00000410093 CCDC58Q4VC31 144 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 GPR139Q6DWJ6 353 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 SHFQ7M4L6 423 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 KANSL1Q7Z3B3 1105 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 KLBQ86Z14 1044 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 CACTIN-AS1Q8N1I8 211 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 Q8N9G6 341 aaPredicted RBP12.41□□□□□ -0.42
LIMS1-205ENST00000410093 POC5Q8NA72 575 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 FAM98AQ8NCA5 519 aaKnown RBP12.41□□□□□ -0.42
LIMS1-205ENST00000410093 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 OR5W2Q8NH69 310 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 NEIL3Q8TAT5 605 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 SMPDL3BQ92485 455 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 TMEM203Q969S6 136 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 CCDC74AQ96AQ1 378 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 MNTQ99583 582 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 EDEM2Q9BV94 578 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 SLC7A5P2Q9GIP4 190 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 WWTR1Q9GZV5 400 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 OR51V1Q9H2C8 321 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 FKRPQ9H9S5 495 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 NANSQ9NR45 359 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 TOR4AQ9NXH8 423 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 PLEKHB1Q9UF11 243 aaPredicted RBP12.41□□□□□ -0.42
LIMS1-205ENST00000410093 SPTBN4Q9H254 2564 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 KNL1Q8NG31 2342 aa12.41□□□□□ -0.42
LIMS1-205ENST00000410093 HEATR5AQ86XA9 2040 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 OR6C70A6NIJ9 312 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 SLC19A2O60779 497 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 REM1O75628 298 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 MT-ATP6P00846 226 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 RANBP1P43487 201 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 HTR3AP46098 478 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 CENPAP49450 140 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 DIO1P49895 249 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 SLC16A1P53985 500 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 NRG3P56975 720 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 CBFBQ13951 182 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 SHBQ15464 509 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 ZNF74Q16587 644 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 SNAP47Q5SQN1 464 aa12.4□□□□□ -0.42
LIMS1-205ENST00000410093 STPG1Q5TH74 334 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms