RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 BAIAP2L1Q9UHR4 511 aa6.78□□□□□ -1.32
LSM5-202ENST00000409292 MOKQ9UQ07 419 aa6.78□□□□□ -1.32
LSM5-202ENST00000409292 TRAPPC4Q9Y296 219 aa6.78□□□□□ -1.32
LSM5-202ENST00000409292 VWC2LB2RUY7 222 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ZNF587BE7ETH6 402 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ATP6V1G2-DDX39BF2Z307 99 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ETV2O00321 342 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 COPEO14579 308 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 SCAMP2O15127 329 aaKnown RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 URI1O94763 535 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 LINC00032P0C843 101 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 IFNGR1P15260 489 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 CDH2P19022 906 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 PRPS1L1P21108 318 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 MATN1P21941 496 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 PPOXP50336 477 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 IDH3GP51553 393 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 MAD2L1Q13257 205 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 KIAA0040Q15053 153 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ZNF141Q15928 474 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 WHAMMP3Q1A5X7 153 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 NDUFAF6Q330K2 333 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ZNF385BQ569K4 471 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 C9orf135Q5VTT2 229 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 LIPMQ5VYY2 423 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 CLEC6AQ6EIG7 209 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 B3GLCTQ6Y288 498 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 RNF165Q6ZSG1 346 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 AAED1Q7RTV5 226 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 GLCCI1Q86VQ1 547 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ARFGAP2Q8N6H7 521 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 VPS37AQ8NEZ2 397 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 OR4F15Q8NGB8 312 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 WDR60Q8WVS4 1066 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ZNF75CPQ92670 426 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 GCDHQ92947 438 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 SLC35G5Q96KT7 338 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ANKRD27Q96NW4 1050 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 OR7D2Q96RA2 312 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 SDF2Q99470 211 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 KATNB1Q9BVA0 655 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 TAPBPLQ9BX59 468 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 BPESC1Q9GZL8 116 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ANKZF1Q9H8Y5 726 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 CACYBPQ9HB71 228 aaKnown RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 POLE3Q9NRF9 147 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 CA10Q9NS85 328 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 TBK1Q9UHD2 729 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 ING1Q9UK53 422 aaPredicted RBP6.77□□□□□ -1.33
LSM5-202ENST00000409292 GRIP1Q9Y3R0 1128 aa6.77□□□□□ -1.33
LSM5-202ENST00000409292 IGHV4-61A0A0C4DH41 118 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 ZNF716A6NP11 495 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 B4DSR2 109 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 TRIM77I1YAP6 450 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 LY6HO94772 140 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 C6orf47O95873 294 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 OR4A8P0C604 315 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 BCKDHAP12694 445 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 DAOP14920 347 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 ITGA2P17301 1181 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 CCNA2P20248 432 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 EFNA1P20827 205 aaPredicted RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 RYKP34925 604 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 DVL1P1P54792 670 aaPredicted RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 SRSF2Q01130 221 aaKnown RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 SKP2Q13309 424 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 EFNB3Q15768 340 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 RFTN2Q52LD8 501 aaPredicted RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 EXOSC6Q5RKV6 272 aaKnown RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
LSM5-202ENST00000409292 TMEM225Q6GV28 225 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 VHLLQ6RSH7 139 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 IFT20Q8IY31 132 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 FNDC5Q8NAU1 212 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 IL17RDQ8NFM7 739 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 OR52E4Q8NGH9 312 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 FAM46AQ96IP4 442 aaKnown RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 FCRL1Q96LA6 429 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 SORCS2Q96PQ0 1159 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 SLC38A2Q96QD8 506 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 DUSP26Q9BV47 211 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 SF3B5Q9BWJ5 86 aaKnown RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 PLA2G12AQ9BZM1 189 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 PIF1Q9H611 641 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 PPCSQ9HAB8 311 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 CTPS2Q9NRF8 586 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 SIRT3Q9NTG7 399 aaPredicted RBP6.76□□□□□ -1.33
LSM5-202ENST00000409292 OXSMQ9NWU1 459 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 PRDM4Q9UKN5 801 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 WDR45Q9Y484 360 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 SPEF1Q9Y4P9 236 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 CCL27Q9Y4X3 112 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
LSM5-202ENST00000409292 RNF103-CHMP3A0A140T963 221 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 NPIPB9F8W1W9 429 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 G3V2L1 256 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 LSM1O15116 133 aaKnown RBP6.75□□□□□ -1.33
LSM5-202ENST00000409292 ZNF208O43345 1280 aa6.75□□□□□ -1.33
LSM5-202ENST00000409292 TRIM13O60858 407 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms