RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 NDUFB10O96000 172 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 CCDC166P0CW27 439 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 NCK1P16333 377 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 MX1P20591 662 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 GNA11P29992 359 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 EPS15P42566 896 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 KIR2DS4P43632 304 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 SULT1E1P49888 294 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 HLCSP50747 726 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 BIDP55957 195 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 SEC61GP60059 68 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 OGDHQ02218 1023 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ZMYND11Q15326 602 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ZNF77Q15935 545 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 DGUOKQ16854 277 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 PHYHD1Q5SRE7 291 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ATL3Q6DD88 541 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 RUFY3Q7L099 469 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ARCQ7LC44 396 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 FAM220AQ7Z4H9 259 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ZNF589Q86UQ0 364 aaPredicted RBP1.92□□□□□ -2.1
CD47-203ENST00000398258 NRMQ8IXM6 262 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 RDH10Q8IZV5 341 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 CNPY4Q8N129 248 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 C6orf223Q8N319 242 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ATP6V0D2Q8N8Y2 350 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 OR10G3Q8NGC4 313 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 OR2AP1Q8NGE2 309 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 LINC01006Q8NI28 216 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 BRSK1Q8TDC3 778 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 DNAJA4Q8WW22 397 aaPredicted RBP1.92□□□□□ -2.1
CD47-203ENST00000398258 N4BP2L2Q92802 583 aaPredicted RBP1.92□□□□□ -2.1
CD47-203ENST00000398258 FRAT1Q92837 279 aaPredicted RBP1.92□□□□□ -2.1
CD47-203ENST00000398258 C10orf35Q96D05 121 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 TM4SF19Q96DZ7 209 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 PAGE5Q96GU1 130 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 C16orf74Q96GX8 76 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 B3GALT6Q96L58 329 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 PLEKHF1Q96S99 279 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 COPS8Q99627 209 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ARHGDIGQ99819 225 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 GAL3ST1Q99999 423 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 CNPY3Q9BT09 278 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 GON7Q9BXV9 100 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 NMUR2Q9GZQ4 415 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 ANKRD19PQ9H560 264 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 REEP4Q9H6H4 257 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 FOLH1BQ9HBA9 442 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 KIF25Q9UIL4 384 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 RPL36Q9Y3U8 105 aaKnown RBP1.92□□□□□ -2.1
CD47-203ENST00000398258 UGT2A1Q9Y4X1 527 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 NEUROG3Q9Y4Z2 214 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 FRMPD3Q5JV73 1810 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 ARHGAP23Q9P227 1491 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 IGHV3OR16-13A0A075B7E8 117 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 A0A1W2PPV9 198 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 PSMB11A5LHX3 300 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 HELTA6NFD8 242 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 TRIM64CA6NLI5 447 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 KLLNB2CW77 178 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 LOC110117498-PIK3R3F6TDL0 507 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 KIF2AO00139 706 aaPredicted RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 HDAC3O15379 428 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 POLR2DO15514 142 aaKnown RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 ZNF780AO75290 641 aaPredicted RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 STAMBPO95630 424 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 DUX4L4P0CJ87 422 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 VHLP40337 213 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 ATP1B3P54709 279 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 CDK16Q00536 496 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 KYAT1Q16773 422 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 DUSP7Q16829 419 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 PARP15Q460N3 678 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 FHL5Q5TD97 284 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 OTPQ5XKR4 325 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 OR52E8Q6IFG1 317 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 ZNF544Q6NX49 715 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 ZYG11AQ6WRX3 759 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 IL34Q6ZMJ4 242 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 CDR2LQ86X02 465 aaPredicted RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 VRK2Q86Y07 508 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 EGFL6Q8IUX8 553 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 OR51S1Q8NGJ8 323 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 SETD7Q8WTS6 366 aaKnown RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 MAIP1Q8WWC4 291 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 UFD1Q92890 307 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 TPD52L3Q96J77 140 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 SLC35E1Q96K37 410 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 CNOT6LQ96LI5 555 aaKnown RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 MYCBPQ99417 103 aaPredicted RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 RNF2Q99496 336 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 NICN1Q9BSH3 213 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 TCHPQ9BT92 498 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 FAIM2Q9BWQ8 316 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 YTHDF1Q9BYJ9 559 aaKnown RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 GCOM2Q9BZD3 368 aaPredicted RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 ISG20L2Q9H9L3 353 aaKnown RBP1.91□□□□□ -2.1
CD47-203ENST00000398258 CD274Q9NZQ7 290 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 B4GALT7Q9UBV7 327 aa1.91□□□□□ -2.1
CD47-203ENST00000398258 COPS3Q9UNS2 423 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms