RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 SAMD8Q96LT4 415 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 NR1H4Q96RI1 486 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-203ENST00000397442 APOL4Q9BPW4 351 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 SLC25A19Q9HC21 320 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 CACNA1AO00555 2505 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 LAMA5O15230 3695 aa24.83■■□□□ 1.57
CPNE1-203ENST00000397442 HCN1O60741 890 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 ASAH2BP0C7U1 165 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 RPS4XP62701 263 aaKnown RBP24.82■■□□□ 1.56
CPNE1-203ENST00000397442 MYBPC1Q00872 1141 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 ACSM5Q6NUN0 579 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 C5orf46Q6UWT4 87 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 THSD4Q6ZMP0 1018 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 SETD9Q8NE22 299 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 FAM81AQ8TBF8 368 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 DNAJA3Q96EY1 480 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 ARL5BQ96KC2 179 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 C5orf34Q96MH7 638 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 TBC1D23Q9NUY8 699 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 ZNF337Q9Y3M9 751 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 HSPE1-MOB4S4R3N1 261 aa24.82■■□□□ 1.56
CPNE1-203ENST00000397442 K7ENP7 123 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 TPD52P55327 224 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-203ENST00000397442 ZNF766Q5HY98 468 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 CLEC12AQ5QGZ9 265 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 INO80CQ6PI98 192 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-203ENST00000397442 SMARCD3Q6STE5 483 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 ENTHD1Q8IYW4 607 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 TSSK6Q9BXA6 273 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 NANSQ9NR45 359 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 PNPLA3Q9NST1 481 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 RAXQ9Y2V3 346 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 MRPS18CQ9Y3D5 142 aaKnown RBP24.81■■□□□ 1.56
CPNE1-203ENST00000397442 MED12Q93074 2177 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 RCBTB2O95199 551 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 NUP107P57740 925 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 B3GALT5-AS1P59052 145 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 IL5RAQ01344 420 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 GLYR1Q49A26 553 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-203ENST00000397442 FAM69AQ5T7M9 428 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 LAIR2Q6ISS4 152 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 RPL13AP3Q6NVV1 102 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 SLC27A4Q6P1M0 643 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 C3orf33Q6P1S2 294 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 C10orf53Q8N6V4 93 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 OR4Q3Q8NH05 313 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 RELTQ969Z4 430 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 ZNF703Q9H7S9 590 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-203ENST00000397442 FKRPQ9H9S5 495 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 SERINC1Q9NRX5 453 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 AASSQ9UDR5 926 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 RNF6Q9Y252 685 aa24.81■■□□□ 1.56
CPNE1-203ENST00000397442 OR2M5A3KFT3 312 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 M0R129 80 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 ZNF17P17021 662 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 RFC3P40938 356 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 CD97P48960 835 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 CHN2P52757 468 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 SELENBP1Q13228 472 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 MAD2L1BPQ15013 274 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-203ENST00000397442 SYT14P1Q58G82 188 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 FAM83FQ8NEG4 500 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-203ENST00000397442 ATP6V1C2Q8NEY4 427 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 DDIT4LQ96D03 193 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 TTTY12Q9BZ98 90 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 OR2B2Q9GZK3 357 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 ZNF226Q9NYT6 803 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 ZNF229Q9UJW7 825 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 NCOR2Q9Y618 2525 aa24.8■■□□□ 1.56
CPNE1-203ENST00000397442 FTCDNL1E5RQL4 147 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 H3BML4 177 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 KLRC4-KLRK1H3BQV0 150 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 GLSO94925 669 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-203ENST00000397442 AHSA1O95433 338 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 TSPAN19P0C672 248 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 GABRB1P18505 474 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 ELK4P28324 431 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 MEOX1P50221 254 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 SMSP52788 366 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 GXYLT1Q4G148 440 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 RAET1LQ5VY80 246 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 OR6S1Q8NH40 331 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 POTEKPQ9BYX7 375 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 PCDHGA9Q9Y5G4 932 aaKnown RBP24.79■■□□□ 1.56
CPNE1-203ENST00000397442 IGF2RP11717 2491 aa24.79■■□□□ 1.56
CPNE1-203ENST00000397442 TNRC6AQ8NDV7 1962 aaKnown RBP24.79■■□□□ 1.56
CPNE1-203ENST00000397442 BHLHE40O14503 412 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 MT-ATP6P00846 226 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 PEPDP12955 493 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 GDF1P27539 372 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 SHC1P29353 583 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 CDC42P60953 191 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 TOMM20Q15388 145 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 YRDCQ86U90 279 aaKnown RBP24.78■■□□□ 1.56
CPNE1-203ENST00000397442 ZFP62Q8NB50 900 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-203ENST00000397442 TMEM178AQ8NBL3 297 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 RHOXF1Q8NHV9 184 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 CNIH3Q8TBE1 160 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 TMEM185BQ9H7F4 350 aa24.78■■□□□ 1.56
CPNE1-203ENST00000397442 RASSF1Q9NS23 344 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms