RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SHC1P29353 583 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 CD79BP40259 229 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 APOBEC1P41238 236 aaKnown RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 ERFP50548 548 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 GZMMP51124 257 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 RAC3P60763 192 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 RNPS1Q15287 305 aaKnown RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 ADRM1Q16186 407 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 ZNF239Q16600 458 aaKnown RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 IZUMO2Q6UXV1 221 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 CYP2R1Q6VVX0 501 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 PLEKHM3Q6ZWE6 761 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 ZNF440Q8IYI8 595 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 PACRGLQ8N7B6 248 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 LINC01560Q8TB33 94 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 CANT1Q8WVQ1 401 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 CNOT9Q92600 299 aaKnown RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 SLCO4A1Q96BD0 722 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 ZNF524Q96C55 264 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 QRSL1Q9H0R6 528 aaKnown RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 OPN3Q9H1Y3 402 aaPredicted RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 Q9H521 79 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 GP6Q9HCN6 339 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 A4GALTQ9NPC4 353 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 FANCFQ9NPI8 374 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 PLSCR4Q9NRQ2 329 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 RASSF1Q9NS23 344 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 DNAJB12Q9NXW2 375 aaKnown RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 EGFL7Q9UHF1 273 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 ZNF232Q9UNY5 417 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 ANKRD17O75179 2603 aaKnown RBP13.02□□□□□ -0.33
SEC13-208ENST00000397109 AKAP6Q13023 2319 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 A0A0G2JPF8 293 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 CLDN24A6NM45 220 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 HNRNPCL2B2RXH8 293 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 HNRNPCL3B7ZW38 293 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 BCHEP06276 602 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 TFPTP0C1Z6 253 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 HNRNPCL4P0DMR1 293 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 ARAFP10398 606 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 POU2F1P14859 743 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 UQCRBP14927 111 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 RYKP34925 604 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 HTR3AP46098 478 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 KCNJ5P48544 419 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 RBBP4Q09028 425 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 MAPK11Q15759 364 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 CYP51A1Q16850 503 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 LIN52Q52LA3 116 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 ZNF474Q6S9Z5 364 aaPredicted RBP13.01□□□□□ -0.33
SEC13-208ENST00000397109 GRINAQ7Z429 371 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 HMGN2P46Q86SG4 172 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 CDH24Q86UP0 819 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 ADGRG5Q8IZF4 528 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 ZNF610Q8N9Z0 462 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 OR10A6Q8NH74 314 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 RNF128Q8TEB7 428 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 SLC38A5Q8WUX1 472 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 ROBO4Q8WZ75 1007 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 ZNF570Q96NI8 536 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 PKP2Q99959 881 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 ARMC7Q9H6L4 198 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 COQ10BQ9H8M1 238 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 RAB26Q9ULW5 256 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 CLEC4AQ9UMR7 237 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 PDZD2O15018 2839 aa13.01□□□□□ -0.33
SEC13-208ENST00000397109 DSPPQ9NZW4 1301 aa13□□□□□ -0.33
SEC13-208ENST00000397109 SH3D21A4FU49 640 aa13□□□□□ -0.33
SEC13-208ENST00000397109 FAAHO00519 579 aa13□□□□□ -0.33
SEC13-208ENST00000397109 CASKO14936 926 aa13□□□□□ -0.33
SEC13-208ENST00000397109 GSTA4O15217 222 aa13□□□□□ -0.33
SEC13-208ENST00000397109 BCAS1O75363 584 aaPredicted RBP13□□□□□ -0.33
SEC13-208ENST00000397109 THBS1P07996 1170 aa13□□□□□ -0.33
SEC13-208ENST00000397109 NUDT7P0C024 238 aa13□□□□□ -0.33
SEC13-208ENST00000397109 PEX2P28328 305 aa13□□□□□ -0.33
SEC13-208ENST00000397109 IDH2P48735 452 aaKnown RBP13□□□□□ -0.33
SEC13-208ENST00000397109 CLK1P49759 484 aaKnown RBP13□□□□□ -0.33
SEC13-208ENST00000397109 FAM27E3Q08E93 113 aa13□□□□□ -0.33
SEC13-208ENST00000397109 LARS2Q15031 903 aaKnown RBP13□□□□□ -0.33
SEC13-208ENST00000397109 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
SEC13-208ENST00000397109 MRPL2Q5T653 305 aaKnown RBP13□□□□□ -0.33
SEC13-208ENST00000397109 FCRLAQ7L513 359 aa13□□□□□ -0.33
SEC13-208ENST00000397109 STK32CQ86UX6 486 aa13□□□□□ -0.33
SEC13-208ENST00000397109 PTOV1Q86YD1 416 aa13□□□□□ -0.33
SEC13-208ENST00000397109 MICU2Q8IYU8 434 aa13□□□□□ -0.33
SEC13-208ENST00000397109 OR52P1PQ8NH57 321 aa13□□□□□ -0.33
SEC13-208ENST00000397109 CENPNQ96H22 339 aaPredicted RBP13□□□□□ -0.33
SEC13-208ENST00000397109 TMEM19Q96HH6 336 aa13□□□□□ -0.33
SEC13-208ENST00000397109 OR5B2Q96R09 309 aa13□□□□□ -0.33
SEC13-208ENST00000397109 POLDIP3Q9BY77 421 aaKnown RBP13□□□□□ -0.33
SEC13-208ENST00000397109 SRXN1Q9BYN0 137 aa13□□□□□ -0.33
SEC13-208ENST00000397109 CHRNA9Q9UGM1 479 aa13□□□□□ -0.33
SEC13-208ENST00000397109 IFT52Q9Y366 437 aa13□□□□□ -0.33
SEC13-208ENST00000397109 A0A1W2PNR3 127 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 C16orf97H3BN30 126 aa12.99□□□□□ -0.33
SEC13-208ENST00000397109 DENRO43583 198 aaKnown RBP12.99□□□□□ -0.33
SEC13-208ENST00000397109 PRKD3O94806 890 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms