RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 HNRNPCL2B2RXH8 293 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 HNRNPCL3B7ZW38 293 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 GPR171O14626 319 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 FRS3O43559 492 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 HNRNPCL1O60812 293 aaKnown RBP16.12■□□□□ 0.17
FXN-203ENST00000396366 AKR7A3O95154 331 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 HNRNPCL4P0DMR1 293 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 UQCRBP14927 111 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 PTNP21246 168 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 CXCR1P25024 350 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 ATP5J2P56134 94 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 OR7A5Q15622 319 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 ZNF672Q499Z4 452 aaPredicted RBP16.12■□□□□ 0.17
FXN-203ENST00000396366 TIMM23BQ5SRD1 257 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 C9orf135Q5VTT2 229 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 SERPINA11Q86U17 422 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 MSRB3Q8IXL7 192 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 ZNF440Q8IYI8 595 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 C10orf111Q8N326 155 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 OR52N5Q8NH56 324 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 LRRC8CQ8TDW0 803 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 FBXW5Q969U6 566 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 MUCL1Q96DR8 90 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 ATP6V1G3Q96LB4 118 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 USB1Q9BQ65 265 aaKnown RBP16.12■□□□□ 0.17
FXN-203ENST00000396366 NAA11Q9BSU3 229 aaPredicted RBP16.12■□□□□ 0.17
FXN-203ENST00000396366 BDH2Q9BUT1 245 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 TRIM2Q9C040 744 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 CXorf56Q9H5V9 222 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 SLC52A3Q9NQ40 469 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 ASB6Q9NWX5 421 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 MAGED1Q9Y5V3 778 aaPredicted RBP16.12■□□□□ 0.17
FXN-203ENST00000396366 FLVCR1Q9Y5Y0 555 aa16.12■□□□□ 0.17
FXN-203ENST00000396366 CIB4A0PJX0 185 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 LIPT2A6NK58 231 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 SHISA9B4DS77 424 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 POLR3GO15318 223 aaPredicted RBP16.11■□□□□ 0.17
FXN-203ENST00000396366 EIF1BO60739 113 aaKnown RBP16.11■□□□□ 0.17
FXN-203ENST00000396366 ITGA5P08648 1049 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 IDUAP35475 653 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 CDKN1AP38936 164 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 RPS4XP62701 263 aaKnown RBP16.11■□□□□ 0.17
FXN-203ENST00000396366 SLC17A1Q14916 467 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 PGGHGQ32M88 737 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 PAGE3Q5JUK9 113 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 OTUD3Q5T2D3 398 aaPredicted RBP16.11■□□□□ 0.17
FXN-203ENST00000396366 RNF220Q5VTB9 566 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 WBP2NLQ6ICG8 309 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 BLOC1S3Q6QNY0 202 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 CASP12Q6UXS9 341 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 ZIC4Q8N9L1 334 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 SPATA9Q9BWV2 254 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 C1QTNF6Q9BXI9 259 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 SLC7A10Q9NS82 523 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 CCDC167Q9P0B6 97 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 ZNF232Q9UNY5 417 aa16.11■□□□□ 0.17
FXN-203ENST00000396366 TLN2Q9Y4G6 2542 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 A0A096LPI6 279 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 OVOL3O00110 214 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 NR5A2O00482 541 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 ABCD4O14678 606 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 TGDSO95455 350 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 HEXAP06865 529 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 THBS1P07996 1170 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 MRPL19P49406 292 aaKnown RBP16.1■□□□□ 0.17
FXN-203ENST00000396366 ZNF83P51522 516 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 MAP2K6P52564 334 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 AQP5P55064 265 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 STX1BP61266 288 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 COPZ1P61923 177 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 LARS2Q15031 903 aaKnown RBP16.1■□□□□ 0.17
FXN-203ENST00000396366 GABRA6Q16445 453 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 KRTAP21-3Q3LHN1 58 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 ZNF311Q5JNZ3 666 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 TSPO2Q5TGU0 170 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 PAQR6Q6TCH4 344 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 P2RY8Q86VZ1 359 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 MUS81Q96NY9 551 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 ZNF385AQ96PM9 386 aaKnown RBP16.1■□□□□ 0.17
FXN-203ENST00000396366 A4GALTQ9NPC4 353 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 CISD1Q9NZ45 108 aaKnown RBP16.1■□□□□ 0.17
FXN-203ENST00000396366 MALT1Q9UDY8 824 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 SLC25A15Q9Y619 301 aa16.1■□□□□ 0.17
FXN-203ENST00000396366 FN1P02751 2386 aaKnown RBP16.09■□□□□ 0.17
FXN-203ENST00000396366 TMEM247A6NEH6 219 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 PDLIM1O00151 329 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 CD8AP01732 235 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 GPIP06744 558 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 NCF2P19878 526 aaPredicted RBP16.09■□□□□ 0.17
FXN-203ENST00000396366 SPOCK1Q08629 439 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 COMTD1Q86VU5 262 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 WDR31Q8NA23 367 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 C3orf49Q96BT1 292 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 SPDL1Q96EA4 605 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 THOC1Q96FV9 657 aaKnown RBP16.09■□□□□ 0.17
FXN-203ENST00000396366 BCL2L10Q9HD36 194 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 ADPRHL2Q9NX46 363 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 THUMPD1Q9NXG2 353 aaKnown RBP16.09■□□□□ 0.17
FXN-203ENST00000396366 TAS2R16Q9NYV7 291 aa16.09■□□□□ 0.17
FXN-203ENST00000396366 SLC9A8Q9Y2E8 581 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms