RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 FCGR2AP12318 317 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 CRHBPP24387 322 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 CA5AP35218 305 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 REEP5Q00765 189 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 SF3A2Q15428 464 aaKnown RBP9.67□□□□□ -0.86
COL4A6-203ENST00000394872 HBMQ6B0K9 141 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF585AQ6P3V2 769 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 GDPGP1Q6ZNW5 385 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 DEFB123Q8N688 67 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 OR4N2Q8NGD1 307 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 ZFAND2BQ8WV99 257 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 HHIPL1Q96JK4 782 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF578Q96N58 590 aaPredicted RBP9.67□□□□□ -0.86
COL4A6-203ENST00000394872 ZIC5Q96T25 663 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 TXLNGYQ9BZA5 131 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 OR51E2Q9H255 320 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 ANKRD10Q9NXR5 420 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 IL37Q9NZH6 218 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 TRAPPC2LQ9UL33 140 aa9.67□□□□□ -0.86
COL4A6-203ENST00000394872 PRAMEF27A3QJZ7 478 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 OR5K3A6NET4 321 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ARPC5O15511 151 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 PTTG1O95997 202 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 LIPCP11150 499 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 PRAMEF9Q5VWM5 478 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 C18orf63Q68DL7 685 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 CD163Q86VB7 1156 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 COMMD7Q86VX2 200 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 SLC35F3Q8IY50 421 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 SIMC1Q8NDZ2 872 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ZFAND1Q8TCF1 268 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 NT5C3BQ969T7 300 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 PFDN5Q99471 154 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 THAP7Q9BT49 309 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-203ENST00000394872 A8MXE2 369 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 H7C1C5 153 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ARPC1BO15143 372 aaKnown RBP9.66□□□□□ -0.86
COL4A6-203ENST00000394872 HPGDSO60760 199 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 SERPINA7P05543 415 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 DHRS4L1P0CG22 281 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 HTR2BP41595 481 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 RPS18P62269 152 aaKnown RBP9.66□□□□□ -0.86
COL4A6-203ENST00000394872 LCN6P62502 163 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 OR8B8Q15620 311 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 MPEG1Q2M385 716 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF355PQ9NSJ1 428 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 SERTAD4Q9NUC0 356 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 LHX6Q9UPM6 363 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 HCRTR1O43613 425 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 SSTR4P31391 388 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ALDH3B1P43353 468 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 TMEM52BQ4KMG9 183 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ELP2Q6IA86 826 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 CNTNAP3BQ96NU0 1288 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 CMSS1Q9BQ75 279 aaKnown RBP9.66□□□□□ -0.86
COL4A6-203ENST00000394872 HIF1ANQ9NWT6 349 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 TMED7-TICAM2A0A0A6YYA0 188 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 PTGER4P35408 488 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 TPMTP51580 245 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 LCN10Q6JVE6 187 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 MED25Q71SY5 747 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 OR4F15Q8NGB8 312 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 IFI44Q8TCB0 444 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 C12orf49Q9H741 205 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF286AQ9HBT8 521 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 OBP2AQ9NY56 170 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 EMCNQ9ULC0 261 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 TMED7Q9Y3B3 224 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF587BE7ETH6 402 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 OR7A17O14581 309 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 MCCD1P59942 119 aaPredicted RBP9.66□□□□□ -0.86
COL4A6-203ENST00000394872 LTBQ06643 244 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 IKZF1Q13422 519 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 GPR176Q14439 515 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 GGTA1PQ4G0N0 100 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 C14orf28Q4W4Y0 310 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 TMEM64Q6YI46 380 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ZNF679Q8IYX0 411 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 FBXO27Q8NI29 283 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ZC3HAV1LQ96H79 300 aaKnown RBP9.66□□□□□ -0.86
COL4A6-203ENST00000394872 QRSL1Q9H0R6 528 aaKnown RBP9.66□□□□□ -0.86
COL4A6-203ENST00000394872 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 EHFQ9NZC4 300 aa9.66□□□□□ -0.86
COL4A6-203ENST00000394872 ITGB2P05107 769 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 MMP12P39900 470 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 MRPS10P82664 201 aaKnown RBP9.65□□□□□ -0.86
COL4A6-203ENST00000394872 GPR19Q15760 415 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 C5orf46Q6UWT4 87 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 TEX19Q8NA77 164 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 DMBX1Q8NFW5 382 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 OR6F1Q8NGZ6 308 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 BRIX1Q8TDN6 353 aaKnown RBP9.65□□□□□ -0.86
COL4A6-203ENST00000394872 SLC46A1Q96NT5 459 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 KATNB1Q9BVA0 655 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 MMP28Q9H239 520 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 FKRPQ9H9S5 495 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 PRKRAO75569 313 aaKnown RBP9.65□□□□□ -0.86
COL4A6-203ENST00000394872 TPOP07202 933 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 HLA-DMAP28067 261 aa9.65□□□□□ -0.86
COL4A6-203ENST00000394872 BIDP55957 195 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms