RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 RDH16O75452 317 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 CDC123O75794 336 aaPredicted RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 SOX14O95416 240 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 TRBC1P01850 177 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 KLKB1P03952 638 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 UBBP0CG47 229 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 UBCP0CG48 685 aaKnown RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 PSMB1P20618 241 aaKnown RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 MMP11P24347 488 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 S100PP25815 95 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 EPHB3P54753 998 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 RPS27AP62979 156 aaKnown RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 UBA52P62987 128 aaKnown RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 ID3Q02535 119 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 IL24Q13007 206 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 CPSF6Q16630 551 aaKnown RBP eCLIP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 TMEM44Q2T9K0 475 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 SGO1Q5FBB7 561 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 CPTPQ5TA50 214 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 OR5M10Q6IEU7 315 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 TAF8Q7Z7C8 310 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM90A1Q86YD7 464 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 APCDD1Q8J025 514 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 BEST4Q8NFU0 473 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 OR14A16Q8NHC5 309 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 IFI44Q8TCB0 444 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 MYEOVQ96EZ4 313 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 LINC00615Q96LM1 132 aaPredicted RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 IFT27Q9BW83 186 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 EBPLQ9BY08 206 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 SPATC1LQ9H0A9 340 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 POLR2J3Q9H1A7 115 aaKnown RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 R3HDMLQ9H3Y0 253 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 MTG2Q9H4K7 406 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 HRASLSQ9HDD0 168 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 ACKR4Q9NPB9 350 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 SPHK1Q9NYA1 384 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 ABRACLQ9P1F3 81 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 NCDNQ9UBB6 729 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 VPS29Q9UBQ0 182 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 MLXQ9UH92 298 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 MBD1Q9UIS9 605 aaPredicted RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 SCML2Q9UQR0 700 aa6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 SIRT4Q9Y6E7 314 aaPredicted RBP6.16□□□□□ -1.42
CDKAL1-202ENST00000378610 A0A0G2JLL6 359 aaPredicted RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 TMEM218A2RU14 115 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 ZNF729A6NN14 1252 aaPredicted RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 SLC16A5O15375 505 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 CPSF4O95639 269 aaKnown RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 ANXA5P08758 320 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 MGMTP16455 207 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 ZNF8P17098 575 aaPredicted RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 CNR1P21554 472 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 FPR2P25090 351 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 ACRV1P26436 265 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 PREPP48147 710 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 H2BFSP57053 126 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 PFN3P60673 137 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 CXADRP78310 365 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 DCST1Q5T197 706 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 SPOUT1Q5T280 376 aaKnown RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 LYPLAL1Q5VWZ2 237 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 MBOAT1Q6ZNC8 495 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 PRRT2Q7Z6L0 340 aaPredicted RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 TSPAN33Q86UF1 283 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 FAM185AQ8N0U4 392 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 CDC26Q8NHZ8 85 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 ALG14Q96F25 216 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 C12orf66Q96MD2 445 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 TMED9Q9BVK6 235 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 PIGMQ9H3S5 423 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 FSCN3Q9NQT6 498 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 MRTO4Q9UKD2 239 aaKnown RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 ATXN7L1Q9ULK2 861 aaPredicted RBP6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 ST3GAL5Q9UNP4 418 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 CCDC88CQ9P219 2028 aa6.15□□□□□ -1.42
CDKAL1-202ENST00000378610 COL4A3Q01955 1670 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 C2orf92A0A1B0GVN3 265 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 ANKRD20A5PA0PJZ0 165 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 RNF222A6NCQ9 220 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 SLC9B1P1A6NJY1 282 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 LRRN3E7EW58 273 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 TEX46H3BTG2 121 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 M0QZQ0 153 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 RAB27BO00194 218 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 SPRY1O43609 319 aaPredicted RBP6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 KDELR3O43731 214 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 TOXO94900 526 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 IGHV2-5P01817 119 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 MT-ND4P03905 459 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 H1F0P07305 194 aaKnown RBP6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 MUC1P15941 1255 aaPredicted RBP6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 PCSK1P29120 753 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 HTR1FP30939 366 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 GKP32189 559 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 GPM6BQ13491 265 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 KRT33BQ14525 404 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 MAPK14Q16539 360 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 IDNKQ5T6J7 187 aa6.15□□□□□ -1.43
CDKAL1-202ENST00000378610 ZNF813Q6ZN06 617 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms