RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 GBA2Q9HCG7 927 aaPredicted RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 TMEM9BQ9NQ34 198 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 CA14Q9ULX7 337 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 MYOCOSA0A1B0GUC4 107 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 A0A1B0GUH1 482 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 GPRIN2O60269 458 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 ADRA2CP18825 462 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 ZNF133P52736 654 aaPredicted RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 JAM2P57087 298 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 PLBD1Q6P4A8 553 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 AKR1E2Q96JD6 320 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 RPL10LQ96L21 214 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 TSGA13Q96PP4 275 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 C11orf68Q9H3H3 251 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 STYXL1Q9Y6J8 313 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 UNCXA6NJT0 531 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 SCG5P05408 212 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 GDNFP39905 211 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 POU3F4P49335 361 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 SLC9A3R2Q15599 337 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 PLAC9Q5JTB6 97 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 ZNF684Q5T5D7 378 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 HENMT1Q5T8I9 393 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 C9orf131Q5VYM1 1079 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 TMEM71Q6P5X7 295 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 VITQ6UXI7 678 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 ZFAND4Q86XD8 727 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 C19orf47Q8N9M1 422 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 ZNF566Q969W8 418 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 EID2BQ96D98 161 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 PRDM7Q9NQW5 492 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 BAZ2AQ9UIF9 1905 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ENPP1P22413 925 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 GRPRP30550 384 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 UBE2IP63279 158 aaKnown RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 LRRC26Q2I0M4 334 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 OR13C8Q8NGS7 320 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 PCYT2Q99447 389 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 OR10A2Q9H208 303 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 RHCGQ9UBD6 479 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 C9J4A7 227 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 PLSCR1O15162 318 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SPCS3P61009 180 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 GPM6BQ13491 265 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ZNF718Q3SXZ3 478 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 NADSYN1Q6IA69 706 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 Q6ZTK2 550 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ANGPTL5Q86XS5 388 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 OR1L3Q8NH93 324 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 CA5BP1Q8WTZ4 195 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 COL25A1Q9BXS0 654 aaPredicted RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 PLK3Q9H4B4 646 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 NRXN1Q9ULB1 1477 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ARAP3Q8WWN8 1544 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 A0A1W2PPQ1 181 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TMEM210A6NLX4 147 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 DLX3O60479 287 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TFAP2AP05549 437 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 UBL4AP11441 157 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 GALR1P47211 349 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 DAP3P51398 398 aaKnown RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 GPR17Q13304 367 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SGCAQ16586 387 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TIGD5Q53EQ6 642 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 MAMDC4Q6UXC1 1216 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TMEM139Q8IV31 216 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 LGI3Q8N145 548 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 OR51A7Q8NH64 312 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TMEM125Q96AQ2 219 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 OR4C12Q96R67 309 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SPANXA1Q9NS26 97 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SIRT3Q9NTG7 399 aaPredicted RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 ASCC3Q8N3C0 2202 aaKnown RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 MADDQ8WXG6 1647 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ATP7AQ04656 1500 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 A6NLC8 198 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SEMA7AO75326 666 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SDHAP31040 664 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 ACAA2P42765 397 aaKnown RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.1
LIG3-202ENST00000378526 SNRPEP62304 92 aaKnown RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 HTRA3P83110 453 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 FOXO4P98177 505 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 PLK5Q496M5 336 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 LAX1Q8IWV1 398 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SCMH1Q96GD3 660 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 SENP5Q96HI0 755 aaPredicted RBP8.2□□□□□ -1.1
LIG3-202ENST00000378526 HERPUD2Q9BSE4 406 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 TLE6Q9H808 572 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 CACNA1SQ13698 1873 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 NTSR2O95665 410 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 GLUD1P00367 558 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 GABRA4P48169 554 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 RAC1P63000 192 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 LRRC32Q14392 662 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 COX19Q49B96 90 aa8.2□□□□□ -1.1
LIG3-202ENST00000378526 PHF19Q5T6S3 580 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms