RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 KCNS3Q9BQ31 491 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 BARHL1Q9BZE3 327 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 CDCP1Q9H5V8 836 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 LYRM4Q9HD34 91 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 MMP25Q9NPA2 562 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 MED17Q9NVC6 651 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 TVP23BQ9NYZ1 205 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 C19orf25Q9UFG5 118 aaPredicted RBP11.32□□□□□ -0.6
VRK3-202ENST00000377011 ZNF232Q9UNY5 417 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 ENTPD4Q9Y227 616 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 MMACHCQ9Y4U1 282 aa11.32□□□□□ -0.6
VRK3-202ENST00000377011 EML6Q6ZMW3 1958 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 KDM4EB2RXH2 506 aaPredicted RBP11.31□□□□□ -0.6
VRK3-202ENST00000377011 PROM1O43490 865 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TLX2O43763 284 aaPredicted RBP11.31□□□□□ -0.6
VRK3-202ENST00000377011 CTNSO60931 367 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 AIFM1O95831 613 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 CYC1P08574 325 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TNNI3P19429 210 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 GNLYP22749 145 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 CPN2P22792 545 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 FEN1P39748 380 aaKnown RBP11.31□□□□□ -0.6
VRK3-202ENST00000377011 HTR3AP46098 478 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 SLC9A3P48764 834 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 MAN2A2P49641 1150 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TNFSF10P50591 281 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 GAS1P54826 345 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 HSD17B7P56937 341 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 PMP22Q01453 160 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 DUSP2Q05923 314 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TSPAN31Q12999 210 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 PIN1Q13526 163 aaPredicted RBP11.31□□□□□ -0.6
VRK3-202ENST00000377011 DOC2BQ14184 412 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TRAM2Q15035 370 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 ACER2Q5QJU3 275 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 SLC27A4Q6P1M0 643 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 XKRXQ6PP77 449 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 RASSF6Q6ZTQ3 369 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 ZGRF1Q86YA3 2104 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 ZNF595Q8IYB9 648 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 GDPD1Q8N9F7 314 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 OR1N1Q8NGS0 311 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 LRR1Q96L50 414 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 LMF1Q96S06 567 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 SLX1AQ9BQ83 275 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TEX12Q9BXU0 123 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 SRRQ9GZT4 340 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 GIMAP4Q9NUV9 329 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TXNL4BQ9NX01 149 aaKnown RBP11.31□□□□□ -0.6
VRK3-202ENST00000377011 LYARQ9NX58 379 aaKnown RBP11.31□□□□□ -0.6
VRK3-202ENST00000377011 STMN3Q9NZ72 180 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 TBC1D24Q9ULP9 559 aa11.31□□□□□ -0.6
VRK3-202ENST00000377011 USP9YO00507 2555 aaPredicted RBP11.31□□□□□ -0.6
VRK3-202ENST00000377011 SPTAN1Q13813 2472 aaKnown RBP11.3□□□□□ -0.6
VRK3-202ENST00000377011 M0R3H8 397 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 EMC8O43402 210 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 DDAH2O95865 285 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 CHRM4P08173 479 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 IGFBP1P08833 259 aaPredicted RBP11.3□□□□□ -0.6
VRK3-202ENST00000377011 RNF224P0DH78 156 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 PTBP1P26599 531 aaKnown RBP eCLIP11.3□□□□□ -0.6
VRK3-202ENST00000377011 FGF9P31371 208 aaPredicted RBP11.3□□□□□ -0.6
VRK3-202ENST00000377011 DDOSTP39656 456 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 CD96P40200 585 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 SKP1P63208 163 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 ARG2P78540 354 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 IFITM2Q01629 132 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 TNFRSF17Q02223 184 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 SCN1BQ07699 218 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 TGM3Q08188 693 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 ASAH1Q13510 395 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 GPR50Q13585 617 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 SF3B4Q15427 424 aaKnown RBP eCLIP11.3□□□□□ -0.6
VRK3-202ENST00000377011 ZNF362Q5T0B9 420 aaPredicted RBP11.3□□□□□ -0.6
VRK3-202ENST00000377011 SPINK14Q6IE38 97 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 SIMC1Q8NDZ2 872 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 OR6T1Q8NGN1 323 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 RFKQ969G6 155 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 KCTD7Q96MP8 289 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 JAM3Q9BX67 310 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 POLEQ07864 2286 aa11.3□□□□□ -0.6
VRK3-202ENST00000377011 TRBV11-1A0A0K0K1C0 115 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 HMX3A6NHT5 357 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 RGS5O15539 181 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 IDH3BO43837 385 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 EPPINO95925 133 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 AGR2O95994 175 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 TSPAN19P0C672 248 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 CSNK2A2P19784 350 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 GALP22466 123 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 PRKAR1BP31321 381 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 GABRA5P31644 462 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 SOX18P35713 384 aa11.29□□□□□ -0.6
VRK3-202ENST00000377011 NR0B1P51843 470 aaKnown RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 IGLV3-21P80748 117 aaPredicted RBP11.29□□□□□ -0.6
VRK3-202ENST00000377011 ACSM1Q08AH1 577 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms