RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 AGAP6Q5VW22 663 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 OR7E24Q6IFN5 339 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 SLC22A25Q6T423 547 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 DTX2Q86UW9 622 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 ZNF440Q8IYI8 595 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 MIER2Q8N344 545 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 MAPK1IP1LQ8NDC0 245 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 ITCHQ96J02 903 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 REG4Q9BYZ8 158 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 GRIP2Q9C0E4 1043 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 RMND5AQ9H871 391 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 BARX1Q9HBU1 254 aaPredicted RBP18.52■□□□□ 0.56
VSX1-201ENST00000376707 P2RX2Q9UBL9 471 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 UPB1Q9UBR1 384 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 POU2F3Q9UKI9 436 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 SLC9A8Q9Y2E8 581 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 SLC25A15Q9Y619 301 aa18.52■□□□□ 0.56
VSX1-201ENST00000376707 DSPPQ9NZW4 1301 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 A0A1W2PR80 420 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 NDUFS7O75251 213 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 ANP32DO95626 131 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 GABRA6Q16445 453 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 OR52E4Q8NGH9 312 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 OR9I1Q8NGQ6 314 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 TPT1P8Q9HAU6 139 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 GDF2Q9UK05 429 aaPredicted RBP18.51■□□□□ 0.55
VSX1-201ENST00000376707 PRDM4Q9UKN5 801 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 FLVCR1Q9Y5Y0 555 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 CSPG4Q6UVK1 2322 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 TLN2Q9Y4G6 2542 aa18.51■□□□□ 0.55
VSX1-201ENST00000376707 ZC3H12DA2A288 527 aaKnown RBP18.5■□□□□ 0.55
VSX1-201ENST00000376707 FAM234BA2RU67 622 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 M0R1B8 84 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 TGDSO95455 350 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 ITGA5P08648 1049 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 TFPTP0C1Z6 253 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 PTNP21246 168 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 CXCR1P25024 350 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 CRATP43155 626 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 FOXG1P55316 489 aaPredicted RBP18.5■□□□□ 0.55
VSX1-201ENST00000376707 DMTNQ08495 405 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 SLC17A1Q14916 467 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 LIN52Q52LA3 116 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 PAQR6Q6TCH4 344 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 LSRQ86X29 649 aaPredicted RBP18.5■□□□□ 0.55
VSX1-201ENST00000376707 DEPDC4Q8N2C3 294 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 OR52P1PQ8NH57 321 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 VPS33AQ96AX1 596 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 ATP6V1G3Q96LB4 118 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 MUS81Q96NY9 551 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 RLIMQ9NVW2 624 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 CALML5Q9NZT1 146 aa18.5■□□□□ 0.55
VSX1-201ENST00000376707 ZANQ9Y493 2812 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 CDHR4A6H8M9 788 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 KIAA1324LA8MWY0 1029 aaPredicted RBP18.49■□□□□ 0.55
VSX1-201ENST00000376707 TP53P04637 393 aaPredicted RBP18.49■□□□□ 0.55
VSX1-201ENST00000376707 BCHEP06276 602 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 GPIP06744 558 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 THBS1P07996 1170 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 GKN3PP0CG01 181 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 ETFAP13804 333 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 CD40P25942 277 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 CRISP3P54108 245 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 COPZ1P61923 177 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 KRTAP1-1Q07627 177 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 SPOCK1Q08629 439 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 NRF1Q16656 503 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 OTUD3Q5T2D3 398 aaPredicted RBP18.49■□□□□ 0.55
VSX1-201ENST00000376707 C9orf135Q5VTT2 229 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 VRK2Q86Y07 508 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 SLC38A5Q8WUX1 472 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 C1QTNF6Q9BXI9 259 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 ADAM19Q9H013 955 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 CACYBPQ9HB71 228 aaKnown RBP18.49■□□□□ 0.55
VSX1-201ENST00000376707 SLC7A10Q9NS82 523 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 THUMPD1Q9NXG2 353 aaKnown RBP18.49■□□□□ 0.55
VSX1-201ENST00000376707 DCTN4Q9UJW0 460 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 B3GALT5Q9Y2C3 310 aa18.49■□□□□ 0.55
VSX1-201ENST00000376707 E7EQL1 145 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 TTKP33981 857 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 DSTNP60981 165 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 TGFBR3Q03167 851 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 CEACAM7Q14002 265 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 OR7A5Q15622 319 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 GTDC1Q4AE62 458 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 TSPO2Q5TGU0 170 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 ZNF836Q6ZNA1 936 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 CADM2Q8N3J6 435 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 C17orf78Q8N4C9 275 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 LRRC8CQ8TDW0 803 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 GTF2H4Q92759 462 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 AURKBQ96GD4 344 aaPredicted RBP18.48■□□□□ 0.55
VSX1-201ENST00000376707 ADAD1Q96M93 576 aaKnown RBP18.48■□□□□ 0.55
VSX1-201ENST00000376707 DHRS9Q9BPW9 319 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 CACNG6Q9BXT2 260 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 SLCO1B3Q9NPD5 702 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 TCF7L2Q9NQB0 619 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 JMJD1CQ15652 2540 aa18.48■□□□□ 0.55
VSX1-201ENST00000376707 TMEM247A6NEH6 219 aa18.47■□□□□ 0.55
VSX1-201ENST00000376707 LIPT2A6NK58 231 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms