RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 BEND6Q5SZJ8 279 aaPredicted RBP12.53□□□□□ -0.4
NELFE-201ENST00000375425 OR7E24Q6IFN5 339 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 ZNF440Q8IYI8 595 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
NELFE-201ENST00000375425 OR52E4Q8NGH9 312 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 VPS33AQ96AX1 596 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 AURKBQ96GD4 344 aaPredicted RBP12.53□□□□□ -0.4
NELFE-201ENST00000375425 RADILQ96JH8 1075 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 ALG2Q9H553 416 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 CALML5Q9NZT1 146 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 MALT1Q9UDY8 824 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 FLVCR1Q9Y5Y0 555 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 SLC25A15Q9Y619 301 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 DSPPQ9NZW4 1301 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 KLF11O14901 512 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 BCHEP06276 602 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 ITGA5P08648 1049 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 ZNF83P51522 516 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 CDH11P55287 796 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 DSTNP60981 165 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 COPZ1P61923 177 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 CEACAM7Q14002 265 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 VEZF1Q14119 521 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 ETFDHQ16134 617 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 GABRA6Q16445 453 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 C6orf10Q5SRN2 563 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 PAQR6Q6TCH4 344 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 CASP12Q6UXS9 341 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 ZNF836Q6ZNA1 936 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 MSANTD1Q6ZTZ1 278 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 MIER2Q8N344 545 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 CLIP4Q8N3C7 705 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 TMEM99Q8N816 258 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 TMEM19Q96HH6 336 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 TRAF4Q9BUZ4 470 aaPredicted RBP12.52□□□□□ -0.41
NELFE-201ENST00000375425 C1QTNF6Q9BXI9 259 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 FAIMQ9NVQ4 179 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 UPB1Q9UBR1 384 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 PRDM4Q9UKN5 801 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 ZNF232Q9UNY5 417 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 SLC9A8Q9Y2E8 581 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 PCDHB14Q9Y5E9 798 aa12.52□□□□□ -0.41
NELFE-201ENST00000375425 HIVEP2P31629 2446 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 SVEP1Q4LDE5 3571 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 A0A0G2JPF8 293 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 TMEM247A6NEH6 219 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 LIPT2A6NK58 231 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 HNRNPCL2B2RXH8 293 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 HNRNPCL3B7ZW38 293 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 INAFM1C9JVW0 142 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 PDLIM1O00151 329 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
NELFE-201ENST00000375425 NDUFS7O75251 213 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 ERLIN1O75477 346 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 AKR7A3O95154 331 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 GPIP06744 558 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 HNRNPCL4P0DMR1 293 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 PTNP21246 168 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 PTAFRP25105 342 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 CD40P25942 277 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 BNIP2Q12982 314 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 LARS2Q15031 903 aaKnown RBP12.51□□□□□ -0.41
NELFE-201ENST00000375425 OR7A5Q15622 319 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 RPS26P11Q5JNZ5 115 aaPredicted RBP12.51□□□□□ -0.41
NELFE-201ENST00000375425 OTUD3Q5T2D3 398 aaPredicted RBP12.51□□□□□ -0.41
NELFE-201ENST00000375425 TSPO2Q5TGU0 170 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 C9orf135Q5VTT2 229 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 WBP2NLQ6ICG8 309 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 SLC22A25Q6T423 547 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 EPGNQ6UW88 154 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 DTX2Q86UW9 622 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 CADM2Q8N3J6 435 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 GTF2H4Q92759 462 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 GRIP2Q9C0E4 1043 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 SLCO5A1Q9H2Y9 848 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 SLC7A10Q9NS82 523 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 THUMPD1Q9NXG2 353 aaKnown RBP12.51□□□□□ -0.41
NELFE-201ENST00000375425 MGAT4BQ9UQ53 548 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 ZNF443Q9Y2A4 671 aaPredicted RBP12.51□□□□□ -0.41
NELFE-201ENST00000375425 CHST2Q9Y4C5 530 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 USH1CQ9Y6N9 552 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 CUBNO60494 3623 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 JMJD1CQ15652 2540 aa12.51□□□□□ -0.41
NELFE-201ENST00000375425 FAM234BA2RU67 622 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 E7EQL1 145 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 IGHV4-39P01824 125 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 THBS1P07996 1170 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 PRG2P13727 222 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 ACVR1BP36896 505 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 PPP2R2BQ00005 443 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 RGNQ15493 299 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 ZSWIM7Q19AV6 140 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 RNF220Q5VTB9 566 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 KLHL17Q6TDP4 642 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 WDR31Q8NA23 367 aa12.5□□□□□ -0.41
NELFE-201ENST00000375425 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms