RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PPP5D1E7EU14 171 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 EFNA3P52797 238 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 AGBL4Q5VU57 503 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 PRICKLE2Q7Z3G6 844 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 MAVSQ7Z434 540 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ARFGAP1Q8N6T3 406 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ZFYVE21Q9BQ24 234 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 COPS3Q9UNS2 423 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 LAMP3Q9UQV4 416 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 CTHP32929 405 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 LIPAP38571 399 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 FOXA1P55317 472 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 RPS27LQ71UM5 84 aaKnown RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 FRMD1Q8N878 549 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 HPSE2Q8WWQ2 592 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 GPR52Q9Y2T5 361 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 PTHP01270 115 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 EPHA5P54756 1037 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ARHGAP40Q5TG30 622 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 SHDQ96IW2 340 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 SLC41A2Q96JW4 573 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 NTN4Q9HB63 628 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 PRKAB1Q9Y478 270 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 LEFTY2O00292 366 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 METTL15P1P0C7V9 234 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 CTXN1P60606 82 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 MADCAM1Q13477 382 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 B3GNTL1Q67FW5 361 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 OR4K15Q8NH41 348 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 SMIM4Q8WVI0 70 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 OR11A1Q9GZK7 315 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 MIR1-1HGQ9H1L0 117 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 DDX31Q9H8H2 851 aaKnown RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 SLC6A20Q9NP91 592 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 EXO1Q9UQ84 846 aaKnown RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF443Q9Y2A4 671 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 PHLPP1O60346 1717 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 RPS19P39019 145 aaKnown RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 CATR1Q13166 79 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ABHD4Q8TB40 342 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 C3orf30Q96M34 536 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 SFXN2Q96NB2 322 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 UBQLN4Q9NRR5 601 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 KCNG2Q9UJ96 466 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 FAM221BA6H8Z2 402 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ACOD1A6NK06 481 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 HMGN2P05204 90 aaKnown RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 CDKN1CP49918 316 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ATP1B3P54709 279 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 EGR3Q06889 387 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ENTPD8Q5MY95 495 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ELFN2Q5R3F8 820 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 CAMKMTQ7Z624 323 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF595Q8IYB9 648 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 CSNK1A1LQ8N752 337 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 SPHK2Q9NRA0 654 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 AK6Q9Y3D8 172 aaKnown RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 DVL2O14641 736 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 LILRB5O75023 590 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 C19orf57Q0VDD7 668 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 HSD17B13Q7Z5P4 300 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 BCL7CQ8WUZ0 217 aaPredicted RBP9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ERVMER34-1Q9H9K5 563 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
PTCH1-204ENST00000375290 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 GASTP01350 101 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 TGM1P22735 817 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 XCR1P46094 333 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 TECPR1Q7Z6L1 1165 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 OR5L1Q8NGL2 311 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 OR5K2Q8NHB8 316 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 HMSDA8MTL9 139 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 DOC2BQ14184 412 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CFAP77Q6ZQR2 320 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 RBM38Q9H0Z9 239 aaKnown RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 INIPQ9NRY2 104 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 DGKZQ13574 1117 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SAXO2Q658L1 398 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CASD1Q96PB1 797 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SORBS2O94875 1100 aaKnown RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SNRNP70P08621 437 aaKnown RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 GDPD3Q7L5L3 318 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 PLXDC1Q8IUK5 500 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 OR2A12Q8NGT7 310 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SLC35B4Q969S0 331 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SMDT1Q9H4I9 107 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SRPK3Q9UPE1 567 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 NWD2Q9ULI1 1742 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 ZNF587BE7ETH6 402 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 LAP3P28838 519 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 OLIG2Q13516 323 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 C2orf73Q8N5S3 287 aaPredicted RBP9.5□□□□□ -0.89
PTCH1-204ENST00000375290 TMEM156Q8N614 296 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 C15orf54Q8N8G6 183 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 OR4E2Q8NGC2 313 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 SLC38A5Q8WUX1 472 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 CORO2AQ92828 525 aa9.5□□□□□ -0.89
PTCH1-204ENST00000375290 TMEM59Q9BXS4 323 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms