RNA–Protein interactions for RNA: ENST00000374617.8

WDR46-231, Transcript of WD repeat domain 46, human

APPRIS P1 TSL 1 (best) BASIC

Gene WDR46, Length 2,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-231	ENST00000374617	WBP2NL	Q6ICG8	309 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	ESPNL	Q6ZVH7	1005 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	ADGRE4P	Q86SQ3	457 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	CYP4Z1	Q86W10	505 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	OR52J3	Q8NH60	311 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	NPAS1	Q99742	590 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	TTYH2	Q9BSA4	534 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	ADAM19	Q9H013	955 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	TMEM27	Q9HBJ8	222 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	FAM215A	Q9Y5M1	114 aa		12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	SPIN1	Q9Y657	262 aa	Predicted RBP	12.41	□□□□□ -0.42
WDR46-231	ENST00000374617	HIVEP3	Q5T1R4	2406 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617		A0A1B0GWA3	101 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	DEAF1	O75398	565 aa	Predicted RBP	12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	AGA	P20933	346 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	CLK1	P49759	484 aa	Known RBP	12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	SMS	P52788	366 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	IST1	P53990	364 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	SRY	Q05066	204 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	SRSF1	Q07955	248 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	MERTK	Q12866	999 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	GDF7	Q7Z4P5	450 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	GGN	Q86UU5	652 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	SLC25A43	Q8WUT9	341 aa	Predicted RBP	12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	SLC41A3	Q96GZ6	507 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	DHRS1	Q96LJ7	313 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	FNDC11	Q9BVV2	318 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	MAN2C1	Q9NTJ4	1040 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617	COMMD3-BMI1	R4GMX3	469 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617		U3KQV3	271 aa		12.4	□□□□□ -0.42
WDR46-231	ENST00000374617		A0A0B4J2E0	115 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617		A0A1B0GX12	115 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	TRAPPC13	A5PLN9	417 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	GNGT2	O14610	69 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	EFNA2	O43921	213 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	OR5F1	O95221	314 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	LYPD3	O95274	346 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	TIMP3	P35625	211 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	POLR2H	P52434	150 aa	Known RBP	12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	SUCLG1	P53597	346 aa	Known RBP	12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	CDH12	P55289	794 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	SPIB	Q01892	262 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	LSAMP	Q13449	338 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	C3orf33	Q6P1S2	294 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	ZNF613	Q6PF04	617 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	C3P1	Q6ZMU1	363 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	OFCC1	Q8IZS5	231 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	PIK3C3	Q8NEB9	887 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	CENPN	Q96H22	339 aa	Predicted RBP	12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	CCDC120	Q96HB5	630 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	TUBA1C	Q9BQE3	449 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	POLR2J2	Q9GZM3	115 aa	Known RBP	12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	POLR2J3	Q9H1A7	115 aa	Known RBP	12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	SLC7A7	Q9UM01	511 aa		12.4	□□□□□ -0.43
WDR46-231	ENST00000374617	H1F0	P07305	194 aa	Known RBP	12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	GLI4	P10075	376 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	CLDN15	P56746	228 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	CLDN20	P56880	219 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	PMPCA	Q10713	525 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	TMEM179B	Q7Z7N9	219 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	SSC4D	Q8WTU2	575 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	RND1	Q92730	232 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	WNT2B	Q93097	391 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	C3orf49	Q96BT1	292 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	KLHL15	Q96M94	604 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	BDH2	Q9BUT1	245 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	TIGAR	Q9NQ88	270 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.39	□□□□□ -0.43
WDR46-231	ENST00000374617	LYVE1	Q9Y5Y7	322 aa		12.39	□□□□□ -0.43
WDR46-231	ENST00000374617		A0A1W2PRQ8	180 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	ZNF208	O43345	1280 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	LIMS1	P48059	325 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	HMGA2	P52926	109 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	ST3GAL3	Q11203	375 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	DGCR6	Q14129	220 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	RIPPLY2	Q5TAB7	128 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	ULK3	Q6PHR2	472 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	XKRX	Q6PP77	449 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	WDR88	Q6ZMY6	472 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	ADGRG3	Q86Y34	549 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	NKAIN4	Q8IVV8	208 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	UBQLNL	Q8IYU4	475 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	SMPDL3B	Q92485	455 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	ADGRG7	Q96K78	797 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	TRIB1	Q96RU8	372 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	TM9SF2	Q99805	663 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	PRSS27	Q9BQR3	290 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	REEP1	Q9H902	201 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	C12orf10	Q9HB07	376 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	CHCHD3	Q9NX63	227 aa	Known RBP	12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	RPS6KB2	Q9UBS0	482 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	CHRNA9	Q9UGM1	479 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	SAMHD1	Q9Y3Z3	626 aa	Known RBP	12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	ZNF175	Q9Y473	711 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	TRBV4-1	A0A0J9YWV2	114 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	MBD3L3	A6NE82	208 aa	Predicted RBP	12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	CLCA1	A8K7I4	914 aa		12.38	□□□□□ -0.43
WDR46-231	ENST00000374617	TNFRSF11B	O00300	401 aa		12.38	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms