RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 HIF3AQ9Y2N7 669 aa15.92■□□□□ 0.14
SSBP3-203ENST00000371319 IER3IP1Q9Y5U9 82 aa15.92■□□□□ 0.14
SSBP3-203ENST00000371319 A0A1W2PPW3 197 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 ZC3H12DA2A288 527 aaKnown RBP15.91■□□□□ 0.14
SSBP3-203ENST00000371319 CCDC182A6NF36 153 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 RIIAD1A6NNX1 92 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 TERTO14746 1132 aaKnown RBP15.91■□□□□ 0.14
SSBP3-203ENST00000371319 SUSD5O60279 629 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 TSPAN19P0C672 248 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 CDK4P11802 303 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 CD36P16671 472 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 PRKCAP17252 672 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 UQCRC1P31930 480 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 ETV1P50549 477 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 NFATC3Q12968 1075 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 ITGADQ13349 1161 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 DNASE1L3Q13609 305 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 TMEM164Q5U3C3 297 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 POMZP3Q6PJE2 187 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 MEPCEQ7L2J0 689 aaKnown RBP15.91■□□□□ 0.14
SSBP3-203ENST00000371319 ARMC10Q8N2F6 343 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 ST8SIA1Q92185 356 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 NPAS1Q99742 590 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 PTDSS2Q9BVG9 487 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 CDCP1Q9H5V8 836 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 METTL7AQ9H8H3 244 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 NANSQ9NR45 359 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 H2AFY2Q9P0M6 372 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-203ENST00000371319 YARS2Q9Y2Z4 477 aaKnown RBP15.91■□□□□ 0.14
SSBP3-203ENST00000371319 WIF1Q9Y5W5 379 aa15.91■□□□□ 0.14
SSBP3-203ENST00000371319 CHCHD2Q9Y6H1 151 aaPredicted RBP15.91■□□□□ 0.14
SSBP3-203ENST00000371319 TRAV36DV7A0A075B6V5 113 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 PRR23D1E9PI22 279 aaPredicted RBP15.9■□□□□ 0.14
SSBP3-203ENST00000371319 NPIPB7O75200 414 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 HPP00738 406 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 PRR23D2P0DMB1 279 aaPredicted RBP15.9■□□□□ 0.14
SSBP3-203ENST00000371319 SLC2A5P22732 501 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 F8A1P23610 371 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 AQP2P41181 271 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 CASP3P42574 277 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 RPS5P46782 204 aaKnown RBP15.9■□□□□ 0.14
SSBP3-203ENST00000371319 MLF1P58340 268 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 PRPS1P60891 318 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 RPS15P62841 145 aaKnown RBP15.9■□□□□ 0.14
SSBP3-203ENST00000371319 Q0VFX4 171 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 CRMP1Q14194 572 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 ARMCX4Q5H9R4 360 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 C1QL3Q5VWW1 255 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 SHFQ7M4L6 423 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 SLC37A3Q8NCC5 494 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 TMEM234Q8WY98 164 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 KISS1RQ969F8 398 aaPredicted RBP15.9■□□□□ 0.14
SSBP3-203ENST00000371319 DCUN1D5Q9BTE7 237 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 MND1Q9BWT6 205 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 FKRPQ9H9S5 495 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 NRIP3Q9NQ35 241 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 PPP4R1LQ9P1A2 415 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 KLHL21Q9UJP4 597 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 ZNF229Q9UJW7 825 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 FBXL4Q9UKA2 621 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 ERGIC3Q9Y282 383 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 A0A0C4DFX4 3053 aa15.9■□□□□ 0.14
SSBP3-203ENST00000371319 ETV2O00321 342 aaPredicted RBP15.89■□□□□ 0.13
SSBP3-203ENST00000371319 ARPC3O15145 178 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 TNFSF15O95150 251 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 IFNGP01579 166 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 HIST1H1CP16403 213 aaKnown RBP15.89■□□□□ 0.13
SSBP3-203ENST00000371319 ZNF3P17036 446 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 MSX1P28360 303 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 NOS3P29474 1203 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 RPL4P36578 427 aaKnown RBP15.89■□□□□ 0.13
SSBP3-203ENST00000371319 HTR3AP46098 478 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 CHAF1BQ13112 559 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 SPCS2Q15005 226 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 MED22Q15528 200 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 OPN5Q6U736 354 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 ARSKQ6UWY0 536 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 PROKR2Q8NFJ6 384 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 NLGN4YQ8NFZ3 816 aaPredicted RBP15.89■□□□□ 0.13
SSBP3-203ENST00000371319 OR4F15Q8NGB8 312 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 STK35Q8TDR2 534 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 OTULINQ96BN8 352 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 OPALINQ96PE5 141 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 MGLLQ99685 303 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 CPNE5Q9HCH3 593 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 SDHAF3Q9NRP4 125 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 EXOSC1Q9Y3B2 195 aaKnown RBP15.89■□□□□ 0.13
SSBP3-203ENST00000371319 ADAM18Q9Y3Q7 739 aa15.89■□□□□ 0.13
SSBP3-203ENST00000371319 PCNX2A6NKB5 2137 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 A8MVM7 634 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 J3QRE1 110 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 TP53I11O14683 189 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 AHCYL1O43865 530 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 SLC25A12O75746 678 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 DLSTP36957 453 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 NBL1P41271 181 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 ERVK-25P63136 954 aa15.88■□□□□ 0.13
SSBP3-203ENST00000371319 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.88■□□□□ 0.13
SSBP3-203ENST00000371319 DBPQ10586 325 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms