RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 TRDV1A0A1B0GX56 115 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 HTR3EA5X5Y0 456 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 LRIT2A6NDA9 550 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TBC1D3FA6NER0 549 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 URADA6NGE7 173 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TBC1D3LB9A6J9 549 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 H3BN98 237 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 MKRN2OSH3BPM6 223 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 C19orf84I3L1E1 186 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 FFAR1O14842 300 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 EMC8O43402 210 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PROM1O43490 865 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PRKYO43930 277 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RAD1O60671 282 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 HCN1O60741 890 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ENTPD6O75354 484 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 SNAPC5O75971 98 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CNOT4O95628 575 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 LY86O95711 162 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 OPN1SWP03999 348 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CSF2P04141 144 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 BCHEP06276 602 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TBC1D3HP0C7X1 549 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 HSMCR30P0CW71 290 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 VSIG10L2P0DP72 767 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 NR2F1P10589 423 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ALOX12P18054 663 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CSNK2A2P19784 350 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ZNF10P21506 573 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 C5AR1P21730 350 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PBLDP30039 288 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PRKAR1BP31321 381 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 GABRA5P31644 462 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 KIR2DL3P43628 341 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 GSSP48637 474 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 MTNR1BP49286 362 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CLCNKAP51800 687 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 LIM2P55344 173 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 WNT4P56705 351 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RAB25P57735 213 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 STXBP1P61764 594 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PPP3R1P63098 170 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PSPHP78330 225 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CDK3Q00526 305 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 SRSF2Q01130 221 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 MC1RQ01726 317 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CD69Q07108 199 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TSPAN31Q12999 210 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ASAH1Q13510 395 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 NFE2L1Q14494 772 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 DECR1Q16698 335 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TSTQ16762 297 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RNF151Q2KHN1 245 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 MINDY4Q4G0A6 757 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 DDI2Q5TDH0 399 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TBC1D3GQ6DHY5 549 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TBC1D3CQ6IPX1 549 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 JMJD6Q6NYC1 403 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PGBD2Q6P3X8 592 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 MZT2AQ6P582 158 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ZCCHC12Q6PEW1 402 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CD200R1LQ6Q8B3 271 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CCBE1Q6UXH8 406 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RASSF6Q6ZTQ3 369 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ABI3BPQ7Z7G0 1075 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 GALNT10Q86SR1 603 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RAB43Q86YS6 212 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PHC2Q8IXK0 858 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TBC1D3Q8IZP1 549 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RNF113BQ8IZP6 322 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RNF175Q8N4F7 328 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 PSD4Q8NDX1 1056 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 OR9Q2Q8NGE9 314 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TEX47Q8TBZ9 253 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TMEM163Q8TC26 289 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ZFPM2Q8WW38 1151 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 RPL3LQ92901 407 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 SLC25A46Q96AG3 418 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 NEIL1Q96FI4 390 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ZC3HAV1LQ96H79 300 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 LRFN5Q96NI6 719 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 AMDHD1Q96NU7 426 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 OPALINQ96PE5 141 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 BBS4Q96RK4 519 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 GFM1Q96RP9 751 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 SMAD5Q99717 465 aaKnown RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CENPOQ9BU64 300 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 B3GNT4Q9C0J1 378 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 STRADBQ9C0K7 418 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 SLC22A4Q9H015 551 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 OR51E2Q9H255 320 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 CXXC4Q9H2H0 198 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 NELFAQ9H3P2 528 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 FN3KQ9H479 309 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ARMC7Q9H6L4 198 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 HHATLQ9HCP6 504 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 SIRT3Q9NTG7 399 aaPredicted RBP5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 ASB6Q9NWX5 421 aa5.94□□□□□ -1.46
ECHDC1-202ENST00000368289 TAC3Q9UHF0 121 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms