RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 OR4K15Q8NH41 348 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 PAPOLGQ9BWT3 736 aaKnown RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 ARPC5LQ9BPX5 153 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 TIMM29Q9BSF4 260 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 KIR2DS5A0A0G2JLQ3 304 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 A0A0G2JNG1 304 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 TRDV1A0A1B0GX56 115 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 KIR2DS3K7RE56 304 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 PIP5K1CO60331 668 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 OR8G3PP0DMU2 310 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 IDUAP35475 653 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 LIPAP38571 399 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 XCR1P46094 333 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 KIR2DS5Q14953 304 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 VASNQ6EMK4 673 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 NDUFAF7Q7L592 441 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 GCDHQ92947 438 aaPredicted RBP13.84□□□□□ -0.19
CHD4-201ENST00000357008 SNX11Q9Y5W9 270 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 RAB19A4D1S5 217 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 SLC9B1P1A6NJY1 282 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 HIDE1A8MVS5 230 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 ADAMTS4O75173 837 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 TRAPPC2P0DI81 140 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 TRAPPC2BP0DI82 140 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 SLC39A13Q96H72 371 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 GPATCH2Q9NW75 528 aa13.84□□□□□ -0.19
CHD4-201ENST00000357008 LOC102725191A0A1B0GVB3 256 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 PRICKLE3O43900 615 aaPredicted RBP13.83□□□□□ -0.2
CHD4-201ENST00000357008 STK17BO94768 372 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 MCATQ8IVS2 390 aaKnown RBP13.83□□□□□ -0.2
CHD4-201ENST00000357008 IL22RA1Q8N6P7 574 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 TNFSF12O43508 249 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 ZNF217O75362 1048 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 AIFM1O95831 613 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 HTR1FP30939 366 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 TAS2R30P59541 319 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 GALNT9Q9HCQ5 603 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 A0A1W2PPV4 95 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 ANKRD30BLA7E2S9 258 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 ONECUT3O60422 494 aaPredicted RBP13.83□□□□□ -0.2
CHD4-201ENST00000357008 GJB3O75712 270 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 FURINP09958 794 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 SERPINA2P20848 420 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 PTBP1P26599 531 aaKnown RBP eCLIP13.83□□□□□ -0.21e-7■□□□□ 9.8
CHD4-201ENST00000357008 BMPR1AP36894 532 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 PIGAP37287 484 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 NTHL1P78549 312 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 HTR4Q13639 388 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 KDM4DQ6B0I6 523 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 SLC51BQ86UW2 128 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 MRPL41Q8IXM3 137 aaKnown RBP13.83□□□□□ -0.2
CHD4-201ENST00000357008 OR6T1Q8NGN1 323 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 MED20Q9H944 212 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 IL23AQ9NPF7 189 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 FTSJ1Q9UET6 329 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 PSMB5P28074 263 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 PPT1P50897 306 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 ATP1B3P54709 279 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 Q499Y3 187 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 SIAH3Q8IW03 269 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 SFXN2Q96NB2 322 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 NOX4Q9NPH5 578 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 KDM4EB2RXH2 506 aaPredicted RBP13.83□□□□□ -0.2
CHD4-201ENST00000357008 C1SP09871 688 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 ELAVL4P26378 380 aaKnown RBP13.83□□□□□ -0.2
CHD4-201ENST00000357008 HOXC13P31276 330 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 UBE2KP61086 200 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 TBPL2Q6SJ96 375 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 OR52I1Q8NGK6 324 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 RSPRY1Q96DX4 576 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 GFOD1Q9NXC2 390 aa13.83□□□□□ -0.2
CHD4-201ENST00000357008 LILRB3O75022 631 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SDC3O75056 442 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 KCNK2O95069 426 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 DBHP09172 617 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 S100A11P31949 105 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 APLNRP35414 380 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SRYQ05066 204 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SLX4IPQ5VYV7 408 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 KCNIP4Q6PIL6 250 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 OR56B1Q8NGI3 324 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 PHYHIPQ92561 330 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SLC35B4Q969S0 331 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 CRB3Q9BUF7 120 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SAMD10Q9BYL1 202 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 BOLA1Q9Y3E2 137 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 PIAS3Q9Y6X2 628 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 A0A0B4J2A0 478 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 TOR1AO14656 332 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 SHOXO15266 292 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 IGHG1P01857 330 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 ITGB2P05107 769 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 CLDN12P56749 244 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 MKXQ8IYA7 352 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 RNF141Q8WVD5 230 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 RBPMSQ93062 196 aaKnown RBP13.82□□□□□ -0.2
CHD4-201ENST00000357008 ALG12Q9BV10 488 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 ZNF416Q9BWM5 594 aa13.82□□□□□ -0.2
CHD4-201ENST00000357008 STARD5Q9NSY2 213 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms